Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0973 ATGATGTATTTGTTATTTAATGCTGAATTAAGGACTGCTGGTCTATTTGGTGAATCTGAAAAAGTCAAGTGGCGTGGAACATGGGTTGTTAAAACAGTGATTAGAAGACAAATTTATGATGATCGTGTTACAATGATATTGTCTGCAAAAGAAAATACTCTCTTAAGGGAGCTTCGACATCCCAATATTTTGCAGTTCCTTGGTTCAATTGTGCATGGGGAAGAGATGATCCTGATTACAGAGCATTTGTCAAAAGGGAACTTGAAAACTATTTTGGAAAAGAAAAACCGTCTTGACCTAGCAACTTCTGTGCGCTACGCACTTGATATTGCTAGGTAA 339 0.3717 MMYLLFNAELRTAGLFGESEKVKWRGTWVVKTVIRRQIYDDRVTMILSAKENTLLRELRHPNILQFLGSIVHGEEMILITEHLSKGNLKTILEKKNRLDLATSVRYALDIAR* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0973 112 SUPERFAMILY Protein kinase-like (PK-like) 14 112 IPR011009 -
Vvi14g0973 112 FunFam serine/threonine-protein kinase STY46-like 5 84 - -
Vvi14g0973 112 ProSiteProfiles Protein kinase domain profile. 5 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0973 112 PANTHER LIM DOMAIN KINASE 1 8 112 - -
Vvi14g0973 112 Pfam Protein tyrosine and serine/threonine kinase 26 112 IPR001245 GO:0004672|GO:0006468
Vvi14g0973 112 Gene3D Transferase(Phosphotransferase) domain 1 6 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0973 Vvi-Chr14 19108490 19110627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0973 7 112 MAP Kinase Kinase Kinase AT1G14000 44.340 6.54e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vvi14g0973 PK_Tyr_Ser-Thr 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0973 K06272 - vvi:100852545 196.823