Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0972 ATGACTGTACGTCATGAACAAGATTCAAATGAAGTGAATTTTGATATTTCAGAACTGAATTTGCAGCACTCATCAAAGATTGAACAGGGTCTATTTGGTGAATCTGAAAAAGTCAAGTGGCGTGGAACATGGGTTGTTAAAACAGTGATTAGAAGACAAATTTATGATGATCGTGTTACAATGATATTGTCTGCAAAAGAAAATACTCTCTTAAGGGAGCTTCGACATCCCAATATTTTGCAGTTCCTTGGTTCAATTGTGCATGGGGAAGAGATGATCCTGATTACAGAGCATTTGTCAAAAGGGAACTTGAAAACTATTTTGGAAAAGAAAAACCGTCTTGACCTAGCAACTTCTGTGCGCTACGCACTTGATATTGCTAGGGGTATGAATTATCTTCATGAGCATAAGCCCTCGCCCATAGTCCACAACCATTTGGATCTTGAAAACTTGTTACAAGATGAAGGTGGCCACTTGAAGATTGGTGATTATTGGGTTCAAATGTTGTATGAAAGACAAAATTGTCAAGATAGTTGCCAAAGCATTAGTGGTTCTGGTATCATTAGCAATCCATCAAATGGCACCATGAAAGATATCTATGCGTTTGGATTCATATTTCATCAGATGTTAGAAGGAAGTCTTATGAATAACAATAAGAGCCCTGACAATATGCATCTCAAATCTGGAGAATTTGAACCCAAGTTTTACATAAGTCGCTGCCCTAAGAGAATTCAAGAATTGATAGAGCAGTGCGTGAGTGGAGATCCATCACAGACGCCCACATTTGCTTCAGTCATAGCAATTCTTGAGGAAGTTTCCATGACTCTTGGAAGACCTGCTTGCCCTGTCTGTTGA 855 0.3883 MTVRHEQDSNEVNFDISELNLQHSSKIEQGLFGESEKVKWRGTWVVKTVIRRQIYDDRVTMILSAKENTLLRELRHPNILQFLGSIVHGEEMILITEHLSKGNLKTILEKKNRLDLATSVRYALDIARGMNYLHEHKPSPIVHNHLDLENLLQDEGGHLKIGDYWVQMLYERQNCQDSCQSISGSGIISNPSNGTMKDIYAFGFIFHQMLEGSLMNNNKSPDNMHLKSGEFEPKFYISRCPKRIQELIEQCVSGDPSQTPTFASVIAILEEVSMTLGRPACPVC* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0972 284 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0972 284 Pfam Protein tyrosine and serine/threonine kinase 23 268 IPR001245 GO:0004672|GO:0006468
Vvi14g0972 284 FunFam serine/threonine-protein kinase STY46-like 14 100 - -
Vvi14g0972 284 Gene3D Transferase(Phosphotransferase) domain 1 3 278 - -
Vvi14g0972 284 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 272 - -
Vvi14g0972 284 SUPERFAMILY Protein kinase-like (PK-like) 21 274 IPR011009 -
Vvi14g0972 284 PIRSF ILK 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0972 Vvi-Chr14 19083467 19130914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0972 1 277 MAP Kinase Kinase Kinase AT4G18950 33.916 4.72e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vvi14g0972 PK_Tyr_Ser-Thr 8.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0972 K06272 - vvi:100852545 554.288