Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0919 ATGGACCACATGGTCGGTCGAGTCGTTGAAAGCATCATCACCTTCCTCTTGATGTTCGTAGTCTGCGCCGTTGCCACATATAGTAGAGCGAGTGGAGGCTTTGCTGGTCTCGCCATTGGAATGACTATATTGCTCGTATCAGGAGCATCATTGAACCCAGCAAGAAGCATCGGACCAGCTATGGTGAAGCATATCTATACACAGGACTTTGGATCTATATATTTGGCCCAATTATTGGAGCCATTGCAGGAATCTATATACAGAACCCAAGAGGAGATGCATGAATTACTTCTGAGTTTTGCTGAAGCTAGAGCTACAGTTGTGAGACTTAAAGGAGAGGATAGGGCACTTTGA 354 0.4548 MDHMVGRVVESIITFLLMFVVCAVATYSRASGGFAGLAIGMTILLVSGASLNPARSIGPAMVKHIYTQDFGSIYLAQLLEPLQESIYRTQEEMHELLLSFAEARATVVRLKGEDRAL* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0919 117 PANTHER AQUAPORIN NIP2-1 6 69 IPR034294 -
Vvi14g0919 117 Pfam Major intrinsic protein 7 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0919 117 SUPERFAMILY Aquaporin-like 4 67 IPR023271 -
Vvi14g0919 117 Gene3D Glycerol uptake facilitator protein. 1 79 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0919 Vvi-Chr14 17758809 17762011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0919 8 114 Major Intrinsic Protein MIP AT5G37810 42.017 7.52e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0919 K09874 - vvi:100256997 84.7297