Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0918 ATGTCAAGAAAGCCAGATGAAATGACAGAAGAGATCTCAAAGGTTGAAGAAGGTCTGGGCAATGCCTATAAGCCCAAAGCCATCGACGAGGTCTACTTGTGTACTTCACCTGCGGTTGTAACCATCACACAAAAGGTGATAGCAGAAGTGATAGGGACGTATTTTGTGGTATTTGCGGGATGTGGATCAGTGGCAGTGAATGGGATATATGGGTCAGTGACATTCCCAGGAGTAGCAGCCACGTGGGGTTTGATAGTGTTGGTGATGATCTACGCTCTCGGTCATATTTCTGGTGCTCATTTCAATCCCGCCGTCACCATTACTTTTGCCATTCTCCGACGTTTCCCATACTGGCAGGTTCCATTGTACATTATAGGTCAATTAATGGGATCAATTCTAGCAAGTGGGACATTATCATTCATGTTCAATATAGATCGTGAAGCTTATTTTGGAACTGTTCCTGCCGGATCTCATGGCCAGTCTTTAGTCCTTGAAATCATCATCACCTTCCTACTCATGTTCGTCATCTCCGGCGTTGCCACCGATAGTAGAGCGACAGGAGAATTGGCTGGGATCGCAGTTGGAATGACTATAATGTTGAATGTCTTTGTTGCTGGGCCTGTATCAGGAGCATCAATGAACCCAGCAAGAAGCATTGGACCAGCTTTGGTGAAGCATGTTTATAAAGGACTGTGGGTGTATGTAATTGGCCCAATTATTGGAGCCATTGCAGGGGGGCTTACATATAATTTAATCAGATTTACTGAGAAGCCTCTTAGTGAGTTAACCAAGACTAGCTCCTTGCTCAGGACCATCTCCAAGAGTGTCCCTAGTACTTCCACTTAA 846 0.4504 MSRKPDEMTEEISKVEEGLGNAYKPKAIDEVYLCTSPAVVTITQKVIAEVIGTYFVVFAGCGSVAVNGIYGSVTFPGVAATWGLIVLVMIYALGHISGAHFNPAVTITFAILRRFPYWQVPLYIIGQLMGSILASGTLSFMFNIDREAYFGTVPAGSHGQSLVLEIIITFLLMFVISGVATDSRATGELAGIAVGMTIMLNVFVAGPVSGASMNPARSIGPALVKHVYKGLWVYVIGPIIGAIAGGLTYNLIRFTEKPLSELTKTSSLLRTISKSVPSTST* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0918 281 Gene3D Glycerol uptake facilitator protein. 7 264 IPR023271 -
Vvi14g0918 281 ProSitePatterns MIP family signature. 100 108 IPR022357 -
Vvi14g0918 281 PANTHER AQUAPORIN NIP2-1 24 265 IPR034294 -
Vvi14g0918 281 CDD MIP 44 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 Pfam Major intrinsic protein 40 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 NCBIfam MIP family channel protein 48 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 SUPERFAMILY Aquaporin-like 41 262 IPR023271 -
Vvi14g0918 281 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 PRINTS Major intrinsic protein family signature 195 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi14g0918 281 PRINTS Major intrinsic protein family signature 232 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0918 Vvi-Chr14 17711147 17713378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0918 1 281 Major Intrinsic Protein MIP AT5G37810 65.371 1.84e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0918 K09874 - vvi:100256997 538.88