Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0907 ATGGGTTGCTCCCAAGGCGCTTGCACTGACACTAGGAAGGCTTTTGATGGCCCAAATGCTTCATACGCTTCCTCTGTAACTGCTGACGACCACTCCTGTGACCATGATGAGCTGAGAGTCAAGAGTTTGCTGAAGAAAATGGTTTGGGAATTTGGGTTGGGTTGTGTTTATCCGGTGAACCGGCGCCGGAGCTCCGGGGGCAAGGGTGAGATGCAGAGAGACAAGGGGAAGAACAGTCTGGAGCACAACAAGGCATGGCTGCTGGCAGAGTCTGGTGGGTGTGGTGCAGAGCTCTCAAATGCTGATCCTCAATCCGTTCATTCGTCGTTCAGGTTTAGTTTCTGTTCTCAGGTTGAACTGGAATCTTTGAATATGAGTTCTTCCACAGCTGCCACCGTTTTAATGGTGAATTTGGACAATGGGCTGACCCAATCTCGGTCCAAGGAGCTGAAATGGCGAAGAATCGAGTCATTGGAGAGGAGCATCTCTCCAGTCGCCAACACATTGATTAGATTCGGCTATGCTGAAATTGTTTCGGCCACTCGAAATTTTAACAAAGGCAGAGTTTTGGGGAGAGGAGCATTGAGCTGTGTTTTCAGAGGGAGAGTTGGGTTTTTGAGGACCGCAGTGGCGATTAAGCGATTAGATAAGGAAGATAAAGAGTCTGCAAAGGCGTTTTGTAGAGAATTAATGATTGCAAGCTCTCTTCAGAACCCAAATATTGTTCCACTTGTGGGGTTTTGTATTGATCCTGAGGAGGGCTTGTTCTTAGTCTACAAATATGTCTCCGGTGGAAGCTTAGAGCGGCATTTGCATGAGAAGAAGAGAGGGGTAAAGGGTTATTCATCCCTTCCATGGTCTGTGAGGTATAAGGTTGCCGTCGGAGTTGCGGAGTCCGTGGCATATCTACACAGTGGAACAGATAGATGTGTTGTTCACAGAGACATTAAACCTTCAAACATCCTCCTCTCTTCCAAGAAAATACCCAAGTTGTGTGATTTTGGATTGGCTACATGGACTCCTGCGCCTTCTGTCCCTTTCCTTTGCAAGACCGTCAAAGGGACATTTGGTTATTTGGCTCCTGAATATTTCCAGCATGGAAAAGTATCTGATAAAACTGATGTCTATGCCTTTGGGGTTGTCCTGTTGGAATTGTTGACTGGCCGAAAGCCAATTGAAGCAAGAAGGCCACCCGGAGAAGAGAACTTGGTCTTGTGGGCAAAGCCACTTTTGCAGCAAGAGTCCATTGAGCAATTGCTTGATCCATGCCTCAAACTCACTCCAAAAAACTCAAATCAAATAGGCAGAATGGTTCAGGCTGCAGCTGCCTGCATTAATAGTGAAGAATCTCGGAGGCCAAGCATTGATGAAGTGGTTGTAATACTAAGAGGAAGAGAACCAAATTGCTCTAGCAGAAAGAAATCCGGTTTCCCTGGGAATGGATTTGTCACTGACTGTTATGCCCAATTACAAACAAAAAGTGAGATGAGAAGCCACTTAGCACTGGCCATGCTAGGAGTTCCAGATTTTGAGGATGATGCTCACTTTTACTGTCGATAG 1560 0.4641 MGCSQGACTDTRKAFDGPNASYASSVTADDHSCDHDELRVKSLLKKMVWEFGLGCVYPVNRRRSSGGKGEMQRDKGKNSLEHNKAWLLAESGGCGAELSNADPQSVHSSFRFSFCSQVELESLNMSSSTAATVLMVNLDNGLTQSRSKELKWRRIESLERSISPVANTLIRFGYAEIVSATRNFNKGRVLGRGALSCVFRGRVGFLRTAVAIKRLDKEDKESAKAFCRELMIASSLQNPNIVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHEKKRGVKGYSSLPWSVRYKVAVGVAESVAYLHSGTDRCVVHRDIKPSNILLSSKKIPKLCDFGLATWTPAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELLTGRKPIEARRPPGEENLVLWAKPLLQQESIEQLLDPCLKLTPKNSNQIGRMVQAAAACINSEESRRPSIDEVVVILRGREPNCSSRKKSGFPGNGFVTDCYAQLQTKSEMRSHLALAMLGVPDFEDDAHFYCR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0907 519 FunFam Putative receptor-like serine/threonine-protein kinase 262 476 - -
Vvi14g0907 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Vvi14g0907 519 Gene3D Transferase(Phosphotransferase) domain 1 262 476 - -
Vvi14g0907 519 PANTHER OS08G0249100 PROTEIN 121 475 IPR046958 -
Vvi14g0907 519 ProSiteProfiles Protein kinase domain profile. 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0907 519 SUPERFAMILY Protein kinase-like (PK-like) 165 462 IPR011009 -
Vvi14g0907 519 FunFam probable serine/threonine-protein kinase PBL7 145 261 - -
Vvi14g0907 519 SMART serkin_6 184 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0907 519 Pfam Protein kinase domain 184 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0907 519 Gene3D Phosphorylase Kinase; domain 1 169 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0907 Vvi-Chr14 17377595 17380884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0907 171 462 Trihelix Transcription Factor Family AT1G70460 40.541 1.27e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Vvi14g0907 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0907 - - vvi:100263787 1049.27