Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0877 ATGAAACCATTTCATTTTCTGCTCTTCTTCACGTTCTCGTCTCTGATTTTGCTACCCACTGGAAAATCAGATCTCGCCTCGGAGAGAGCCGCTCTTCTGGTGCTTCGTTCGGCCGTCGGCGGTCGATCTCTGCTCTGGAACGTTTCCCAGTCTACGCCTTGTTTATGGGTCGGAGTCAAGTGCCAGCAAAATCGAGTCGTCGAGTTGCGGCTCCCCGGGATGGGTCTTTCCGGCCAACTCCCCGCCGGCTCCATCGGAAACCTCACCGAACTTCACACCCTCTCTCTCCGCTTCAACGCCCTCTCCGGCTCGGTACCCCCGGACTTGGCCTCATGCGTCAACCTCCGAAACCTCTACTTGCAGGGAAACTTTTTCTCCGGTGACATTCCGGAGTTTTTGTTCACTCTCAGTAACCTTATTCGCCTTAACCTCGCCGGAAACAACTTCTCCGGCGAGATCTCTTCGGACTTTAATAAGCTCACCCGGTTGGGCACTCTGTATTTGAACGACAACCACCTCACCGGCTCGATCCCAAAGCTGAATTTGAATCTTCAACAGTTCAATGTTTCCAACAATCAGTTGGACGGCTCGATCCCCTCCAAGCTCTCGAATTTTCCGGCGACGGCCTTCCAAGGCAACTCGCTCTGTGGAGGACCCCTTCAATCTTGCCCCCACAAGAGCAAATTATCCGGTGGAGCCATTGCCGGAATTATAATTGGATCCGTTGTCGCATTTGTCCTAATTCTCGTGGTTCTGATCCTTTTGTGTCGGAAAAAGAGTAGCAAAAAGACGGGCTCCACCGATGTTGCGCCGGTGAAGCACACTGAGACAGAAATGTTGGGCGAAAAATCGGTGGGAGATGGAGATAGCACAAGTATGGGGTACCCCATTCGTGGAGCAGCAGTGCTGGCTGCAGCAGCAACCTCTAAAGGTAGTGGGGATAAGAGATTGGTGTTTTTCCGGAATTCTAATAGGATTTTTGATTTGGAGGACTTGTTAAGGGCGTCTGCGGAGGTTTTGGGGAAGGGAACTTTCGGGACGGCATATAAAGCGTCATTGGATATGGAGGTGGAGCGGGTGGTTGTGGCAGTGAAAAGGCTCAAGGATGTGTCTGTATCCGAAAAGGAATTTAGGGAGAAGATCGAAATTGCAGGAGCAATGGATCATGAGAATTTGGTCCCACTCAGGGCTTACTACTATAGCAAGGATGAGAAGCTTATTGTATATGATTATATGCCAATGGGAAGCCTGTCTGCGCTTCTGCATGGGAACAGGGGGGCCGGCAGGACTCCACTAAATTGGGAAGCTAGGTCTGGCATTGCCCTTGGAGCCGCCCGAGGGATTGCCTATATCCACTCACGGGGCTCTGCAAGTTCCCATGGAAACATCAAGTCATCAAATATCCTTCTCACTAAGTCCTATGAAGCCCGAGTTTCTGACTTTGGCCTTGCTCATCTTGTTGGGCCCACTGCCACTCCTAACCGTGTTGCTGGCTATCGTGCGCCAGAGGTGACAGATGCTCGCAAAGTCTCTCAAAAAGCCGATGTGTACAGCTTTGGTGTATTGCTTTTAGAACTGCTTACAGGAAAGGCTCCCACACATGCCCTCTTAAACGAGGAAGGAGTAGACCTTCCAAGATGGGTTCAGTCTGTGGTTCGAGAAGAGTGGACAGCCGAGGTGTTTGACCTTGAGCTCCTCAGGTACCAGAACGTTGAGGAGGAGATGGTTCAGCTCTTACAGCTGGCCCTTGATTGTGCTGCCCAGTACCCTGACAAGCGCCCTTCCATGCTTGATGTGACCAGCCGTATTGAGGAACTGTGTCGTTCTAGCTCGCAGCATGAGCAAGAGCCAGATCATAATATAATCAATGATGTTCATTCGGTGGACTCGGGTGCACCGGTTCCATCAGTTGTAGATTGA 1920 0.512 MKPFHFLLFFTFSSLILLPTGKSDLASERAALLVLRSAVGGRSLLWNVSQSTPCLWVGVKCQQNRVVELRLPGMGLSGQLPAGSIGNLTELHTLSLRFNALSGSVPPDLASCVNLRNLYLQGNFFSGDIPEFLFTLSNLIRLNLAGNNFSGEISSDFNKLTRLGTLYLNDNHLTGSIPKLNLNLQQFNVSNNQLDGSIPSKLSNFPATAFQGNSLCGGPLQSCPHKSKLSGGAIAGIIIGSVVAFVLILVVLILLCRKKSSKKTGSTDVAPVKHTETEMLGEKSVGDGDSTSMGYPIRGAAVLAAAATSKGSGDKRLVFFRNSNRIFDLEDLLRASAEVLGKGTFGTAYKASLDMEVERVVVAVKRLKDVSVSEKEFREKIEIAGAMDHENLVPLRAYYYSKDEKLIVYDYMPMGSLSALLHGNRGAGRTPLNWEARSGIALGAARGIAYIHSRGSASSHGNIKSSNILLTKSYEARVSDFGLAHLVGPTATPNRVAGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTAEVFDLELLRYQNVEEEMVQLLQLALDCAAQYPDKRPSMLDVTSRIEELCRSSSQHEQEPDHNIINDVHSVDSGAPVPSVVD* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0877 639 Gene3D Phosphorylase Kinase; domain 1 302 411 - -
Vvi14g0877 639 ProSitePatterns Protein kinases ATP-binding region signature. 340 365 IPR017441 GO:0005524
Vvi14g0877 639 ProSiteProfiles Protein kinase domain profile. 334 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0877 639 FunFam pollen receptor-like kinase 1 304 411 - -
Vvi14g0877 639 MobiDBLite consensus disorder prediction 609 623 - -
Vvi14g0877 639 Pfam Leucine rich repeat N-terminal domain 26 61 IPR013210 -
Vvi14g0877 639 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Vvi14g0877 639 SUPERFAMILY Protein kinase-like (PK-like) 338 602 IPR011009 -
Vvi14g0877 639 SUPERFAMILY L domain-like 48 205 - -
Vvi14g0877 639 PANTHER OS05G0588300 PROTEIN 6 611 - -
Vvi14g0877 639 MobiDBLite consensus disorder prediction 609 639 - -
Vvi14g0877 639 Pfam Protein tyrosine and serine/threonine kinase 338 601 IPR001245 GO:0004672|GO:0006468
Vvi14g0877 639 FunFam Probable inactive receptor kinase At1g48480 412 615 - -
Vvi14g0877 639 FunFam Probable inactive receptor kinase RLK902 25 181 - -
Vvi14g0877 639 Gene3D Transferase(Phosphotransferase) domain 1 412 630 - -
Vvi14g0877 639 Gene3D Ribonuclease Inhibitor 181 227 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0877 Vvi-Chr14 16193061 16195718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0877 24 606 Receptor kinase-like Gene Family AT1G48480 60.749 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vvi14g0877 PK_Tyr_Ser-Thr 6.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0877 - - vvi:100267283 1212.98