Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0857 ATGCAGGCAGCTGACATTGTCATTGAATCCTCCAAAATGTGTCATGACAGGAATATTACAACTTTGAACAAATCATTAGGTCCCAAATTCAACAAGCTGGCTAATCCTCCGGAAAATGGGTCCTGCTCATTGCAACACATGGAAGAATATAAAGGGCCTCTACGTGAAGATGAAGCATCATGCCGTTTAACTGATCCAAGTCTAGAAGATGAGCAGGGGATGTTTTGTCTGGGTGAAAGGTCTTTGGCTGATATGGATTTGGCACTGGTGCAACTGAAGAGGAATGGAGGAAAATTATACATGATCATGGAAATTTCTGTCTTCGATCAGATATACAAAGAGCGTCTCGGTGGCATGCGCCCAGGTGGTGATAAAATTTACTATGTCCTTGATAACCAACTTCCTACTGCACTGAAAAGGTTGCAATTCGATAAAGCAACCATTCTTTCTGATATAATTCAATCGCTCAAGGACTTGACAGCTCAAGTTGAGAAACTGAGAGCTGAGAATGCATCACTAAATGAAGAATCCCATGAGTTAACTCAGGAGGAGAATTATCTCGGAGAAGAGAAGGCATCCCTCAAATCGGCTACTAAGAACCTTAATGTTCAATATTAG 618 0.4142 MQAADIVIESSKMCHDRNITTLNKSLGPKFNKLANPPENGSCSLQHMEEYKGPLREDEASCRLTDPSLEDEQGMFCLGERSLADMDLALVQLKRNGGKLYMIMEISVFDQIYKERLGGMRPGGDKIYYVLDNQLPTALKRLQFDKATILSDIIQSLKDLTAQVEKLRAENASLNEESHELTQEENYLGEEKASLKSATKNLNVQY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0857 205 Coils Coil 149 183 - -
Vvi14g0857 205 PANTHER TRANSCRIPTION FACTOR BHLH121 140 205 IPR044579 GO:0003700|GO:0006879
Vvi14g0857 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 187 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0857 Vvi-Chr14 15635487 15636104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0857 140 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 59.091 1.20e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0857 - - vvi:100263414 145.591