Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0850 ATGGGCAGAAATGAGGCTTTAGCATTTGACATGGGTTATGCTCGCTGGCTTGATGAATATCAGAGGCTGATCAATGACCTGAGATCAGTTGTAAATTCTCATGTAGGGGATAATGAACTACACATTCTTGTCGATAGCAACATGGCCACCTACAATGCATGGAGCTATGATGAGCATCTCATTCGAGTAGTTATTTGTTGTGGCCTGTATCCTGGAATTTGCTCTGTTATGCAAAATGGAAAGTCATTCTTATTGAAAACAATGGAGGATGGTCAAGTGCTCTGGCATTCGAATTTAGTCAATGCTCGAGAATGTAAAATTCCATATCCATGGCTAGTTTTCAATGAGAAGATAAAAGTAAACTCTGTTTTCTCCGAGATTCAACAGCTGTGTCTGATTCAGTGCTTCTTCTATTTGGGGGCAACATCTTGA 432 0.4028 MGRNEALAFDMGYARWLDEYQRLINDLRSVVNSHVGDNELHILVDSNMATYNAWSYDEHLIRVVICCGLYPGICSVMQNGKSFLLKTMEDGQVLWHSNLVNARECKIPYPWLVFNEKIKVNSVFSEIQQLCLIQCFFYLGATS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0850 143 PANTHER TRANSCRIPTION FACTOR TGA9 5 52 - -
Vvi14g0850 143 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 61 124 IPR011709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0850 Vvi-Chr14 15468071 15468502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0850 2 63 bZIP Transcription Factor Family AT3G12250 50.000 6.04e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0850 K14442 K15042 vvi:104878096 220.705