Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0840 ATGGACGAGCTCTTGGCTGTTTTGGGTTACAATGTTCGGTCGTCGGACATGGTGGACGTGGCTCAGAAGCTGGAGCAGCTTGAGATGGTTATGGGTAACGCTCAGGAGGATGGGATTTCTCATCTCTCCTCTGGGACTGTTCATTATAACCCCTCCGATCTTTCCGGTTGGGTTCAGTCCATGCTTACTGAGCTCAATCCTCCCTCCTCTGCTTTCGCTTCCTCCTCACAGCAAACCCCCATCGACGATCCTCTCCTTGCTCCCTCCGAGTCCTCTACTATCACCACCCTTGATTTCTCCGGCTCGCGGCAGCAGTCGGAGCACCAGTCTCGCATCTATAACGACAACTCCGACTACGATCTCAGTGCGATTCCGGGCGTTGCCGTGTATCGGCGACCGGACCAACAGGGGGATGGGGAGAAGAGCAGCAAGCGGATGAAAACGGCGTCGTCGTCGTCTTCGTCATCGACGCAACAAGTACAGGAGAATGGGTTGGCGAGTGTCGCCGAGTCGACTCGGCCGGTTGTAGTGGTGGACTCGCAGGAAACGGGTGTGCGACTGGTTCACACCTTGATGGCTTGTGCAGACGCGGTTCAACAGGACAATATGAAGTTGGCAGATGCACTGGTGAAGCACATAGGCCTGCTGGCGGCGTCCCAAGCTGGCGCTATGAGAAAGGTCGCCACCTACTTCGCAGAAGCTCTGGCTCGTCGAATCTACAGAATCTACCCTCAAGACTCTCTGGAATCGTCTTACTCGGATATTCTCCAGATGCACTTCTATGAGGCCTGCCCCTACCTCAAATTCGCCCACTTCACAGCCAATCAAGCCATCCTCGAGGCCTTCGCCGGCGCCAACAGAGTTCATGTCATCGATTTCGGCCTGAAACAGGGGATGCAATGGCCGGCTCTTATGCAGGCCCTAGCATTGCGCCCTGGTGGCCCACCGTCATTTCGACTCACTGGAATTGGCCCTCCGCAGCCGGACAATACCGACGCGTTGCAGCAAGTGGGATGGAAGCTGGCCCAATTGGCTGAGACCATAGGCGTTGAGTTCGAATTCAGGGGATTCGTGGCGAACAGCTTGGCGGATCTGGAGCCATCCATGCTCCAAATCCGGCCGCCAGAGGTGGAGGCCGTGGCGGTGAACTCCGTGCTGGAGCTGCATCGCCTGCTGGCTCGACCGGGGGCCATCGAGAAGGTGTTGTCGTCTATCAAAGCCATGAAGCCGAAAATCGTGACGGTGGTGGAGCAAGAGGCGAGCCACAACGGGCCGGTGTTTCTGGACAGATTCACGGAGGCGCTGCACTACTACTCGAACCTGTTCGACTCACTGGAAGGGTGCGGGGTTTCGCCACCGAGTAGCCAAGACCTGATGATGTCGGAGATATACCTGGGGCGGCAGATATGCAACGTGGTGGCGTGTGAAGGAGCGGAGCGGGTTGAGAGGCACGAGACACTGAGTCAGTGGAGGAGTCGGATGGGGTCAGCAGGGTTCGACCCGGTTCACCTGGGCTCCAACGCCTTCAAGCAGGCGAGCATGCTGTTGGCTTTATTCGCGGGTGGGGACGGGTACAGAGTGGAAGAAAATAATGGGTGTCTGATGCTTGGCTGGCACACTCGTCCCCTCATCGCCACCTCCGCATGGCAACTCAACTCCAACTTCAACCCCACCTCCACCTCTGCCTCCACCTCTGCTCATTCTCAGTGA 1710 0.5743 MDELLAVLGYNVRSSDMVDVAQKLEQLEMVMGNAQEDGISHLSSGTVHYNPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSESSTITTLDFSGSRQQSEHQSRIYNDNSDYDLSAIPGVAVYRRPDQQGDGEKSSKRMKTASSSSSSSTQQVQENGLASVAESTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGLLAASQAGAMRKVATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTANQAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLEPSMLQIRPPEVEAVAVNSVLELHRLLARPGAIEKVLSSIKAMKPKIVTVVEQEASHNGPVFLDRFTEALHYYSNLFDSLEGCGVSPPSSQDLMMSEIYLGRQICNVVACEGAERVERHETLSQWRSRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLNSNFNPTSTSASTSAHSQ* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0840 569 ProSiteProfiles GRAS family profile. 178 550 IPR005202 -
Vvi14g0840 569 Pfam Transcriptional regulator DELLA protein N terminal 2 69 IPR021914 -
Vvi14g0840 569 SMART DELLA_2 2 75 - -
Vvi14g0840 569 MobiDBLite consensus disorder prediction 68 117 - -
Vvi14g0840 569 Coils Coil 17 37 - -
Vvi14g0840 569 Gene3D - 1 65 IPR038088 -
Vvi14g0840 569 Pfam GRAS domain family 187 550 IPR005202 -
Vvi14g0840 569 MobiDBLite consensus disorder prediction 146 167 - -
Vvi14g0840 569 FunFam DELLA protein GAI 1 65 - -
Vvi14g0840 569 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 546 IPR005202 -
Vvi14g0840 569 MobiDBLite consensus disorder prediction 68 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0840 Vvi-Chr14 14807137 14808846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0840 2 553 GRAS Transcription Factor Family AT2G01570 63.684 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vvi14g0840 GRAS 9e-141 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0840 K14494 - vvi:100253268 1073.15