Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0812 ATGATTGAAATGAAGATAAGTCGGCTAGGTAAAAGTTTGATTGATCTTGCTATGATCGGGACAACTTCCAATGCTAATAGCATGCATCAGGCTGAACCTTTCTCCCTAGAGTCCATTGGGTTGGTGGATTTTGAGAACGATTTTACTACTTATAGTAAATCGAAGCAAGTCAAATCCAGCAGCAGTGCTATTGAGACACAGTGCAAATCAATTAGTTCTTCGAATTTAAACAGCAAAGCCACAATGAACTTTCAAATATTCACTCCTCCTAATCCTTTACCAGCGTCAAGCAAACAGCTTGTAGATAGTCAACATTCTTCCGAGGCAACAAATGAAGAGATTGGCGATGGTAAAGACTTCTCTGGTATTGAGATGTTCGCAGCAGCTGCTTGCAATAACAGCATAGGTGATGATGTGACGGAATCAACTACAGAGGATGGTTCAGTTCTGACATATAAAGGAAACAACTCATCTATTTCTACAATGCCTATAAAAGAAACTGTGCTATTGTCTGTGTTGCTATTACGGTTGATAACCAGGATGGGCGCTGAATCGGGAAATGTGGTCTCCTTTATCAGTTCCTCTGCTTCCATAATAAGGAAAAATGGTACTAAAATTCAGAAAAGAACCCTCCATTTGAAGGACATGCAGGGCCGAAGTGTTGAATTAATTCTATGGAGAAATTTCTATAATGCGGAAGGACAAAGGCTGCAAAATATGTGGGTATTTCCTGTTCTGGTTGTGAAATCTGCTAGAATCAATGATTTCAATGGGAAAGCAGTGGGGACTATTTCTACCGGCTAG 804 0.4005 MIEMKISRLGKSLIDLAMIGTTSNANSMHQAEPFSLESIGLVDFENDFTTYSKSKQVKSSSSAIETQCKSISSSNLNSKATMNFQIFTPPNPLPASSKQLVDSQHSSEATNEEIGDGKDFSGIEMFAAAACNNSIGDDVTESTTEDGSVLTYKGNNSSISTMPIKETVLLSVLLLRLITRMGAESGNVVSFISSSASIIRKNGTKIQKRTLHLKDMQGRSVELILWRNFYNAEGQRLQNMWVFPVLVVKSARINDFNGKAVGTISTG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0812 267 SUPERFAMILY Nucleic acid-binding proteins 189 265 IPR012340 -
Vvi14g0812 267 Gene3D - 186 267 IPR012340 -
Vvi14g0812 267 Pfam Replication protein A OB domain 188 266 IPR031657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0812 Vvi-Chr14 13475855 13477470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0812 188 264 Core DNA Replication Machinery Family AT5G45400 60.000 1.46e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0812 K07466 - vvi:100263039 124.02