Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0781 ATGGCAGAGAGCGTTATTACCATCGCTACTACCATTGCTGAAAAAATTGCAGGCTACTTGGTTGCTCCAATTGGACGCCGGCTTAGTTATCTGTTTTGCTACCGCAGCCACATGGATGATCTCAACAAGAAGGTTCAAGAGTTGGGGAGTGTGAGGGGCGACCTTCAGATTACTGTTGATGAAGCTATTAGAAGAGGGGATGAAATCAGACCTATTGTTGAAGACTGGTTGACTCGGGAGGACAAGAATACAGGGGAGGCAAAGACATTCATGGAAGATGAAAAGAAAAGAACCAAGAGCTGTTTCTATGGGTGGTGTCCTAATCTCAAGTCACGTTACCAGCTAGGCAGAGAAGCAGACAAGAAGGCGCAGGTTATTGTTGAAATCCAACAACAATGCAATTTCCCATATGGCGTATCATATCGTGTCCCTCTACGGAATGTAACCTTTAAAAATTATGAACCTTTTAAGTCAAGAGCCTCGACTGTGAATCAAGTTATGGATGCATTAAGAGATGATGAGATCGACAAGATTGGGGTATGGGGCATGGGCGGTGTGGGCAAAACCACGCTGGTCAAACAAGTGGCTCAACTAGCTGAAGATGAGAAGCTGTTCACCGCAGGAGTCTACATAGATGTATCCTGGACTCGAGATTCGGAAAAACTTCAAGAAGGAATTGCTAAAATTCAACAAAAAATTGCAGACATGTTGGGCTTGGAATTTAAGGGGAAGGATGAATCCACGAGAGCAGTTGAACTGAAGCAGAGACTGCAGAAAGAGAAGATCCTTATCATCTTAGATGACATTTGGAAGTTAGTTTGTTTGGAGGAAGTTGGCATTCCTTCTAAAGATGACCAGAAAGGATGCAAAATAGTGTTGGCTTCTAGAAATGAGGACCTATTACGCAAAGACATGGGCGCAAGGGAATGTTTTCCACTTCAACATCTACCAAAAGAAGAAGCTTGGCATTTATTTAAGAAGACAGCAGGTGATTCTGTGGAGGGGGATAAACTGCGACCCATAGCAATTGAGGTAGTTAACGAATGTGAGGGTCTACCAATTGCAATTGTAACAATTGCAAATGCATTAAAAGATGAAAGTGTGGCTGTATGGGAGAATGCTTTGGAAGAACTGAGGAGTGCTGCGCCAACAAACATCAGCGGAGTGGATGACAGGGTATACGGATGTCTGAAGTGGAGCTACAACCATTTGAAAGGTGATGAAGTCAAGTCATTGTTCTTACTTTGTGGTTGGTTGAGTTATGGCGATATTTCAATGCATCAATTGTTGCAGTATGCTATGGGTTTGGATTTGTTTGACCACCTCAAGTCATTGGAGCAAGCAATAAATAAACTAGTTACATTGGTGAGAATCCTCAAAGCCTCAAGCTTGTTACTTGACGGTGAAGATCATGGAGACGATTTTGAAGAAGAAGCCTCAATGTTGCTTTTCATGGATGCTGATAACAAGTATGTCAGGATGCATGATGTTGTTCGTGATGTTGCCAGAAATATTGCATCCAAGGATCCTCATCGATTTGTAGTCAGAGAAGATGTTGAAGAATGGTCAGAGACTGATGGATCCAAATACATCTCTTTAAATTGCAAAGATGTGCATGAGCTTCCTCACAGGTTGGTATGTCCGAAACTTCAATTTTTTCTATTGCAGAAGGGTCCTTCCTTGAAAATCCCACACACATTTTTTGAAGGGATGAACCTACTCAAAGTCTTAGACTTGTCTGAAATGCATTTCACAACACTACCTTCAACGCTTCATTCCCTTCCAAATCTTCGAACATTAAGTCTAGACAGGTGCAAGTTGGGAGACATAGCTCTAATTGGAGAGCTAAAGAAACTACAAGTTCTTAGCTTGGTGGGTTCCGATATTCAACAATTGCCTAGTGAAATGGGGCAGTTGACGAATCTAAGGTTGTTGGATTTGAATGATTGTGAGAAGCTTGAAGTAATTCCACGAAATATCTTATCAAGTCTGTCTCGATTAGAATGTTTGTGCATGAAATCTAGCTTTACTCAATGGGCAGCTGAAGGAGTTAGTGATGGAGAAAGCAATGCTTGTTTATCGGAGCTGAATAATTTGCGTCATTTGACAACTATAGAGATGCAAGTACCAGCTGTCAAGTTGCTACCAAAAGAAGACATGTTCTTTGAGAACTTGACAAGATATGCGATATTTGTAGGCGAAATTCAGCCGTGGGAAACAAATTATAAAACATCAAAAACATTAAGGCTCAGACAGGTTGATAGAAGCTCACTTTTAAGGGATGGAATTGACAAGTTGTTGAAGAAAACTGAAGAACTAAGTTAG 2325 0.4133 MAESVITIATTIAEKIAGYLVAPIGRRLSYLFCYRSHMDDLNKKVQELGSVRGDLQITVDEAIRRGDEIRPIVEDWLTREDKNTGEAKTFMEDEKKRTKSCFYGWCPNLKSRYQLGREADKKAQVIVEIQQQCNFPYGVSYRVPLRNVTFKNYEPFKSRASTVNQVMDALRDDEIDKIGVWGMGGVGKTTLVKQVAQLAEDEKLFTAGVYIDVSWTRDSEKLQEGIAKIQQKIADMLGLEFKGKDESTRAVELKQRLQKEKILIILDDIWKLVCLEEVGIPSKDDQKGCKIVLASRNEDLLRKDMGARECFPLQHLPKEEAWHLFKKTAGDSVEGDKLRPIAIEVVNECEGLPIAIVTIANALKDESVAVWENALEELRSAAPTNISGVDDRVYGCLKWSYNHLKGDEVKSLFLLCGWLSYGDISMHQLLQYAMGLDLFDHLKSLEQAINKLVTLVRILKASSLLLDGEDHGDDFEEEASMLLFMDADNKYVRMHDVVRDVARNIASKDPHRFVVREDVEEWSETDGSKYISLNCKDVHELPHRLVCPKLQFFLLQKGPSLKIPHTFFEGMNLLKVLDLSEMHFTTLPSTLHSLPNLRTLSLDRCKLGDIALIGELKKLQVLSLVGSDIQQLPSEMGQLTNLRLLDLNDCEKLEVIPRNILSSLSRLECLCMKSSFTQWAAEGVSDGESNACLSELNNLRHLTTIEMQVPAVKLLPKEDMFFENLTRYAIFVGEIQPWETNYKTSKTLRLRQVDRSSLLRDGIDKLLKKTEELS* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0781 774 FunFam Probable disease resistance protein At1g61300 144 308 - -
Vvi14g0781 774 Pfam NB-ARC domain 161 402 IPR002182 GO:0043531
Vvi14g0781 774 SUPERFAMILY L domain-like 493 704 - -
Vvi14g0781 774 PRINTS Disease resistance protein signature 177 192 - -
Vvi14g0781 774 PRINTS Disease resistance protein signature 256 270 - -
Vvi14g0781 774 PRINTS Disease resistance protein signature 637 653 - -
Vvi14g0781 774 PRINTS Disease resistance protein signature 349 363 - -
Vvi14g0781 774 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 773 - -
Vvi14g0781 774 Pfam Leucine rich repeat 555 607 IPR001611 GO:0005515
Vvi14g0781 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 416 IPR027417 -
Vvi14g0781 774 Gene3D Ribonuclease Inhibitor 520 774 IPR032675 -
Vvi14g0781 774 Gene3D - 315 404 IPR042197 -
Vvi14g0781 774 SMART AAA_5 174 319 IPR003593 GO:0016887
Vvi14g0781 774 Gene3D - 146 307 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0781 Vvi-Chr14 12452512 12454836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0781 174 657 WRKY Transcription Factor Family AT5G45050 23.048 6.18e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0781 - - vvi:100251264 1302.73