Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0778 ATGATATGGCATCACCAACTTTCACTTGAATTCTTTTGCAAGTTACGAATATTAAGAGTGCATAATTGTCCACGTCTAGTCAATCTTGTTCCATCTCATTTGATACAAAGCTTCCAGAATTTGAAAGAGCTAAATGTGTATGATTGTAAAGCCCTAGAATCTGTGTTTGATTATCGAGGATTTAATGGAGATGGTGGAATCCTCTCAAAAATAGAAACATTGACGTTGGAGAAACTACCTAGACTAAGGCTCACTATATGCAATGAAGACAAGAATGACAACATGAGCTATCTTTTATCACCTTCCAAGTTCAAGGATTTTTACCAACTCAAAGAGCTATATATCATTGATTGTGGGATGCTTTTGGATGGAGAGGTTTCATGTCCTCCTAATTTGGAAGTGTTGGTTCTAAAAAGTCTTCCCAATTTGAAGGAGATAGATGTTGGGATCTTCGCACAGTTAAAAATCCTAATATTAAAGAAACTACCTAGGCTAAGATATACATTTGCTTCCCAGCTCAAGAATTTTCACGATCTCAAAGAGCTACACATCATTGATTGTGGGATGGAAGGCGGGAGAGATGTCAGTACTCCTAGTAATGATGTAGTTCTCTTCAATGAGAAGGCTTCATTCCTTGAATCAAGAGCCTCCACTGTGAACAAAATTATGGATGCCTTAAGAGATGACAATATCAACTTGATAAGAATATGGGGCACGGCCGGTGTGGGCAAAACAACACTGCTGAAACAAGTGGCTCAACAAGCTAACCAACAACAGTTGTTCACCACACAAGCCTATATGGATGTATCCTGGACTCGAGACTCGGATAAACTTCAAGGAGTTGCTGAACTTCAACAAAAAATTGCAGAAAAGGTGTCGGGCGTGCCACTTTGGTTGCAGGATGGATCCGGAATAACGGATGAACTGAAGCGGAGACTGATGATGCTAGGGAAGATCCTTATTATCTTAGATGATATTTGGACGGAAGTTGATTTGGTGAAAGTAGGAATTCCTTTTGAAGGTGATGAGACGCAATGCAAAATAGTGTTGGCTTCGAGAGATGGAGACGTATTATGCAAAGACATGGGCGCACAAATATGTTTTCAGGTGGAACCTTTGCCACCAGAAGAAGCTTGGAGTTTTTTTAAGAAGACATCAGGTGATTCCGTGGAAGAGGATCTTGAACTGCGACCCATAGCCATTCAAGTGGTTGAAGAGTGTGAGGGTCTACCAATTGCAATTGTAACAATTGCAAAGGCATTAAAAGATGAGACCGTGGCTGTATGGAAGAATGCCTTGGAACAACTCAGGAGTTGTTCACCAACAAACATTAGAGCAGTGGATAAGAAGGTTTACTCATGTCTGGAGTGGAGCTACACCCATTTGAAGGGTGATGACGTTAAGTCGTTGTTCTTACTTTGTGGTATGATGAGCTATTGTGATATTTCATTGAATCGCTTGTTTCAATATTGTATGGGTTTGGATTTCTTTGACCACATGGAGCCATTGGAACAAGCAACAAATAAACTAGTTACATTGGTGGAAATCCTCAAAGCCTCAGGCTTGTTACTTGATAGTCATAAAGAGAGACACAATTTTGATGGAAAAAGAGCTTCAAGTTTGCTTTTCATGGATGCTGATAACAAGTTTGTGAGGATGCACGGTGTTGTTCGTGAAGTTGCCAGAGCAATTGCATCCAAGGATCCTCATCCATTTGTAGTTAGAGAAGATGTTGGATTGGGAGAATGGTCAGAGACTGACGAATCCAAAAGGTGCACTTTCATCTCTTTGAATTGCAGAGCTGTGCATGAGCTTCCTCAAGGGTTGGTATGTCCAGAACTTCAATTTTTTCTATTGCATAACAAGAATCCTTCCTTGAATATCCCAAACTCATTTTTTGAAGCAATGAAAAAACTCAAAGTTCTAGATTTGCACAAAATGTGTTTTACAACACTACCTTCATCCTTTGATTCCCTTGCAAATCTCCAAACATTGCGTCTAAATGGGTGCAAGTTGGTAGACATTGCTTTAATTGGAAAGCTAACGAAACTACAAGTTCTTAGCTTGGTGGGTTCTACAATCCAACAATTGCCTAATGAAATGGTGCAATTGACCAATCTAAGGCTGTTGAATTTGAATGATTGCAAGGAGCTCGAAGTAATTCCACCAAATATCTTATCAAGCCTGTCTCGATTAGAATGTTTGTACATGACTTCTAGTTTTACTCAATGGGCGGTTGAAGGTGAAAGCAATGCTTGTTTATCCGAGCTAAATCATTTGTCTTATTTGACAACTTTAGGTATAGATATACCAGATGCCAATTTGCTACCAAAAGGCATTTTATTTGAGAACTTGACAAGATATGCAATATTTGTAGGCAATTTCCAGAGGTACGAAAGATATTGTAGAACCAAAAGAGTGTTGAAGCTTAGGAAAGTCAATAGAAGCTTACATTTGGGGGATGGAATTAGCAAGTTGATGGAGAGAAGTGAAGAACTAGAGTTCATGGAATTAAGTGGTACTAAATATGTTCTTCACTCATCAGATAGGGAAATTTTTCTTGAACTGAAGCATCTTGAAGTTAGTAGTAGTCCTGAGATTCAATATATCGTTGATTCAAAGGATCAACAGTTTCTACAACATGGTGCCTTTCCTTCATTGGAGTCATTGGTTCTTAGGAGACTGCGTAACTTGGAAGAAGTATGGTGTGGCCCAATTCCAATAGGGTCTTTTGGTAATTTAAAAACTCTGCATGTGACTTTTTGTGGTGAATTGAAATTTCTCTTTTTTCTTTCCACGGCTAGAGGCTTTTCCCAGCTTGAAGAAATGACAATAGAAAATTGCTATCTCATGCAACAAATAATTGCATATGAAACAGAGTCAGAAATAAAAGAAGATGGACATGTTGGGACCAACTTGCAACTATTCCCAAAATTGCGATCCTTGAGACTCGAGAGGCTACCACAACTCATCAACTTCAGCTCTGAGTTAGAAACATCTTCCACATCTATGAGCACAAATGCAAGGTCGGAAAACTCATTTTTCAATCATAAGGTTTCATTCCCTAACTTAGAGGAGTTGATACTCAATGATCTATCCAAATTGAAGAATATATGGCATCATCAACTTCTATTTGGATCCTTTTGCAATCTACGGATCTTAAGGATGTACAAATGTCCATGTCTACTCAATCTTGTCCCATCTCATTTGATACACAACTTCCAAAATTTAAAAGAGATAGATGTGCAAGATTGTGAACTCCTAGAACATGTTCCTCAAGGAATTGATGGAAATGTTGAGATCCTCTCAAAGTTAGAAATCTTGAAGTTGGACGACCTGCCTAGGTTGAGATGGATTGAAGACGGGAATGATAGCATGAAATATATTTCCTCTCCTCTGACACTCATGAATATTCAAAACTTCAAAGAACTACATATCACTAATTGTAGAATGGAAGACTTATAG 3465 0.3864 MIWHHQLSLEFFCKLRILRVHNCPRLVNLVPSHLIQSFQNLKELNVYDCKALESVFDYRGFNGDGGILSKIETLTLEKLPRLRLTICNEDKNDNMSYLLSPSKFKDFYQLKELYIIDCGMLLDGEVSCPPNLEVLVLKSLPNLKEIDVGIFAQLKILILKKLPRLRYTFASQLKNFHDLKELHIIDCGMEGGRDVSTPSNDVVLFNEKASFLESRASTVNKIMDALRDDNINLIRIWGTAGVGKTTLLKQVAQQANQQQLFTTQAYMDVSWTRDSDKLQGVAELQQKIAEKVSGVPLWLQDGSGITDELKRRLMMLGKILIILDDIWTEVDLVKVGIPFEGDETQCKIVLASRDGDVLCKDMGAQICFQVEPLPPEEAWSFFKKTSGDSVEEDLELRPIAIQVVEECEGLPIAIVTIAKALKDETVAVWKNALEQLRSCSPTNIRAVDKKVYSCLEWSYTHLKGDDVKSLFLLCGMMSYCDISLNRLFQYCMGLDFFDHMEPLEQATNKLVTLVEILKASGLLLDSHKERHNFDGKRASSLLFMDADNKFVRMHGVVREVARAIASKDPHPFVVREDVGLGEWSETDESKRCTFISLNCRAVHELPQGLVCPELQFFLLHNKNPSLNIPNSFFEAMKKLKVLDLHKMCFTTLPSSFDSLANLQTLRLNGCKLVDIALIGKLTKLQVLSLVGSTIQQLPNEMVQLTNLRLLNLNDCKELEVIPPNILSSLSRLECLYMTSSFTQWAVEGESNACLSELNHLSYLTTLGIDIPDANLLPKGILFENLTRYAIFVGNFQRYERYCRTKRVLKLRKVNRSLHLGDGISKLMERSEELEFMELSGTKYVLHSSDREIFLELKHLEVSSSPEIQYIVDSKDQQFLQHGAFPSLESLVLRRLRNLEEVWCGPIPIGSFGNLKTLHVTFCGELKFLFFLSTARGFSQLEEMTIENCYLMQQIIAYETESEIKEDGHVGTNLQLFPKLRSLRLERLPQLINFSSELETSSTSMSTNARSENSFFNHKVSFPNLEELILNDLSKLKNIWHHQLLFGSFCNLRILRMYKCPCLLNLVPSHLIHNFQNLKEIDVQDCELLEHVPQGIDGNVEILSKLEILKLDDLPRLRWIEDGNDSMKYISSPLTLMNIQNFKELHITNCRMEDL* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0778 1154 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 206 994 - -
Vvi14g0778 1154 Gene3D Ribonuclease Inhibitor 1 194 IPR032675 -
Vvi14g0778 1154 PRINTS Disease resistance protein signature 702 718 - -
Vvi14g0778 1154 PRINTS Disease resistance protein signature 313 327 - -
Vvi14g0778 1154 PRINTS Disease resistance protein signature 233 248 - -
Vvi14g0778 1154 PRINTS Disease resistance protein signature 407 421 - -
Vvi14g0778 1154 Gene3D - 373 462 IPR042197 -
Vvi14g0778 1154 Gene3D Ribonuclease Inhibitor 585 999 IPR032675 -
Vvi14g0778 1154 SUPERFAMILY RNI-like 8 187 - -
Vvi14g0778 1154 Gene3D - 203 367 IPR027417 -
Vvi14g0778 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 474 IPR027417 -
Vvi14g0778 1154 Pfam Leucine rich repeat 620 672 IPR001611 GO:0005515
Vvi14g0778 1154 Pfam NB-ARC domain 217 459 IPR002182 GO:0043531
Vvi14g0778 1154 SUPERFAMILY L domain-like 552 1150 - -
Vvi14g0778 1154 Gene3D Ribonuclease Inhibitor 1000 1154 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0778 Vvi-Chr14 12356549 12363936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0778 230 725 WRKY Transcription Factor Family AT5G45050 21.185 1.56e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0778 - - vvi:100240893 2275.36