Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0768 ATGATTGTTGCAGACCTATCCATTGATGGGAACTCCATGTATGATGACATTACTGGGAACGATCTCCTTTCCGATTACAAATGTGGTGAACCAAGTATGTTGTTTAGTGTCGCTGATACGTTAAACAGAGCCATCACAATGCCTGGTTTAGGGAAGCAGTTGAGGCATGGGAAGCGCTATCGGTATGTCAGCTCTCATGATGTGGTACATTGGGCACGTAGTTTTATGCCGGATTTGAAGCGGGCATGCAAAGATCACTACAGTAAACGTTGCTGGAGCACTGGTTTTAGCCTGAGTTTCAGAATTGTTGCTCTTTCTCCCAGTTTTAAGAATCTTTCCTTGGACCATTTTGTCAAAACATATAAGAGGGCGAATAGAAGGGCGATGTTTCTGGACCATGATGGAACTGTGGTTCTGCAATCTTCCATTGTTAAAACTCCTGGCCTTGAGGACTTAGGAACAGCAGCAGAGCATGGATACTTCATTAAGTGGAATCAGAATTTTAATCGGGAATCAAGTCCTTTACTCATGGACTTTGACTGA 543 0.4328 MIVADLSIDGNSMYDDITGNDLLSDYKCGEPSMLFSVADTLNRAITMPGLGKQLRHGKRYRYVSSHDVVHWARSFMPDLKRACKDHYSKRCWSTGFSLSFRIVALSPSFKNLSLDHFVKTYKRANRRAMFLDHDGTVVLQSSIVKTPGLEDLGTAAEHGYFIKWNQNFNRESSPLLMDFD* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0768 180 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 145 IPR001830 GO:0003824|GO:0005992
Vvi14g0768 180 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 36 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0768 Vvi-Chr14 12065138 12065680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0768 36 172 Trehalose Biosynthesis Gene Families AT1G23870 47.093 9.83e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0768 K16055 - vvi:100251811 217.624