Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0758 ATGGAAGAAATTGTTGCGAAGGTTGCAGCAAAAGTTTCAAAGTGCCTGGTTGTTCCAGTTAAGCGTCAGCTGGGTTATCTGTTTAACTACCGTACCAACATTGAGGACCTCTCTCAAGAGGTTGAGAAGCTGAGGCATGCCAGGGATGGGCACCAACACTCTGTGAATGAAGCTATTGGGAATGGACATAAAATCGAGGATTATGTTTGCAAGTGGTTGACACGTGCTGATGGGTTCATACAAGACGCTTGCAAATTCCTTGAAGATGAGAAAGAGGCACAGAAGAGTTGTTTCAATGGGTTGTGTCCTAATTTGAAGTCCCGGTACCAGCTAAGCAGGGAAGCAAGGAAGAAGGCACGGGTTGCTGTTCAAATGCATGGAGATGGCCAATTTGTGAGGGTATCATATCGTGCCCCTCTGCAAGAGATAAGGTCTGCACCTTCCGAAGCTTTACGATCAAGAGTGTTGACTTTGGATGAAGTCATGGAGGCCTTAAGGGATGCCAAGATCAACAAGATCGGGGTATGGGGGTTGGGCGGTGTCGGGAAGACCACGCTGGTGAAACAAGTGGCTGAACAAGCTGCTCAAGAGAAGTTATTCGACAAGGTGGTCACGGCAGCTGTGTTACAGACTCCAGACTTAAAAAAAATTCAAGGGGAACTTGCAGACCTGCTAGGTATGAAATTTGAGGAGGAGAGTGAACAGGGAAGAGCAGCTCGACTATATCAGAGGATGAACAATGAGAAGACCATCCTCATCATCTTGGATGATATTTGGGCGAAACTTGACTTGGAGAAAATAGGAATTCCTTCTCCAGATCACCACAAAGGATGCAAATTAGTGCTAACTTCTAGAAATGAACACATCTTGTCCAATGAGATGGATACTCAAAAGGATTTTCGAGTTCAACCTTTGCAAGAAGATGAAACATGGATTTTATTTAAGAACACAGCTGGTTCCATTGAAAATCCAGAGTTGCAACCTATAGCTGTTGATGTAGCAAAAGAATGCGCGGGTTTGCCACTTGCAATAGTAACTGTGGCAACAGCATTGAAAGGCGAGAAGAGTGTGTCCATTTGGGAGGATGCCCGGCTACAACTGAAATCGCAAACCTCGACAAACATAACAGGACTGACATCAAATGTATACTCAAGTCTGAAGTTGAGCTACGAACACTTGAAGGGAATTGAAGTGAAGTCATTTTTCTTGCTTTGTGGTTTAATTTCTCAAAATGATTTTCATATATGGGACTTGTTGAAATATGGTGTGGGTCTGCGATTATTTCAAGGAACTAATACATTGGAAGAGGTGAAAAATAGAATAGATACATTGGTTAACAACCTCAAATCCTCAAATTTGTTACTAGAAACTGGCCATAATGCAGTTGTTAGAATGCATGATCTTGTTCGGAGTACTGCCAGAAAAATTGCATCCGATCAACATCATGTGTTTACACTCCAGAATACTACTGTAAGAGTGGAAGGATGGCCAAGGATAGATGAACTCCAGAAGGTCACCTGGGTAAGTCTGCATGACTGTGATATTCATGAACTTCCAGAAGGGCTGGTATGTCCAAAACTTGAACTTTTTGGATGTTATGATGTAAACACCAATTCGGCAGTGCAAATTCCAAACAATTTTTTTGAAGAGATGAAGCAACTCAAAGTATTGCATTTATCTCGAATGCAACTTCCATCGCTGCCCTTATCACTTCAGTGCCTTACAAATCTTCGAACATTGTGTTTGGATGGATGCAAGGTGGGAGACATTGTTATAATTGCAAAGCTAAAGAAATTAGAAATTCTTAGCCTTATGGATTCTGATATGGAACAGTTGCCCAGAGAAATAGCGCAGTTGACTCATCTAAGGATGTTAGATTTGAGCGGTTCTTCGAAACTGAAAGTAATTCCATCAGATGTCATATCAAGCTTGTCCCAATTAGAGAATTTGTGTATGGCAAATAGCTTTACTCAATGGGAGGGGGAAGGAAAGAGTAATGCTTGCCTTGCTGAGTTGAAGCATTTGTCTCATTTAACCTCTTTGGACATACAAATACCAGATGCCAAGTTGCTGCCAAAAGACATAGTCTTTGATACCTTGGTGAGATATAGAATATTTGTAGGTGATGTCTGGAGCTGGGGAGGAATTTTTGAGGCCAATAATACATTGAAGCTCAATAAGTTCGATACAAGCCTTCATCTGGTGGATGGTATCAGCAAGTTGTTGAAGAGAACTGAAGATCTACACTTGCGTGAATTGTGTGGTTTTACTCATGTTCTTTCCAAATTAAATAGGGAGGGTTTTCTTAAATTAAAGCATCTTAATGTTGAAAGCAGCCCAGAGATTCAATATATTGCGAACTCAATGGATCTGACTTCAACACATGGTGTCTTTCCTGTTATGGAGACCTTGTCTCTCAATCAGCTGATTAACTTGCAAGAAGTATGCCATGGTCAATTTCCAGCAGGGTCGTTTGGTTGCTTGAGAAAAGTGGAAGTGGAAGATTGTGATGGCTTGAAATTTCTCTTCTCGTTGTCTGTGGCTAGAGGCCTTTCCCGACTTGTAGAAATAAAAGTAACTAGATGCAAGAGTATGGTTGAGATGGTTTCCCAAGGAAGGAAAGAAATAAAAGAAGATACTGTTAATGTGCCTCTGTTCCCTGAATTGAGACACTTGACATTGCAGGACTTACCCAAGCTCAGTAATTTCTGCTTTGAGGAGAACCCGGTGCACTCGATGCCTCCAAGCACGATTGTTGGTCCTAGTACACCACCTCTCAACCAACCGGTATGTCAATGCTTTTTTAATCACTTCAATTCAAATACATGGAGACTAGCCCCTCATTAA 2847 0.4173 MEEIVAKVAAKVSKCLVVPVKRQLGYLFNYRTNIEDLSQEVEKLRHARDGHQHSVNEAIGNGHKIEDYVCKWLTRADGFIQDACKFLEDEKEAQKSCFNGLCPNLKSRYQLSREARKKARVAVQMHGDGQFVRVSYRAPLQEIRSAPSEALRSRVLTLDEVMEALRDAKINKIGVWGLGGVGKTTLVKQVAEQAAQEKLFDKVVTAAVLQTPDLKKIQGELADLLGMKFEEESEQGRAARLYQRMNNEKTILIILDDIWAKLDLEKIGIPSPDHHKGCKLVLTSRNEHILSNEMDTQKDFRVQPLQEDETWILFKNTAGSIENPELQPIAVDVAKECAGLPLAIVTVATALKGEKSVSIWEDARLQLKSQTSTNITGLTSNVYSSLKLSYEHLKGIEVKSFFLLCGLISQNDFHIWDLLKYGVGLRLFQGTNTLEEVKNRIDTLVNNLKSSNLLLETGHNAVVRMHDLVRSTARKIASDQHHVFTLQNTTVRVEGWPRIDELQKVTWVSLHDCDIHELPEGLVCPKLELFGCYDVNTNSAVQIPNNFFEEMKQLKVLHLSRMQLPSLPLSLQCLTNLRTLCLDGCKVGDIVIIAKLKKLEILSLMDSDMEQLPREIAQLTHLRMLDLSGSSKLKVIPSDVISSLSQLENLCMANSFTQWEGEGKSNACLAELKHLSHLTSLDIQIPDAKLLPKDIVFDTLVRYRIFVGDVWSWGGIFEANNTLKLNKFDTSLHLVDGISKLLKRTEDLHLRELCGFTHVLSKLNREGFLKLKHLNVESSPEIQYIANSMDLTSTHGVFPVMETLSLNQLINLQEVCHGQFPAGSFGCLRKVEVEDCDGLKFLFSLSVARGLSRLVEIKVTRCKSMVEMVSQGRKEIKEDTVNVPLFPELRHLTLQDLPKLSNFCFEENPVHSMPPSTIVGPSTPPLNQPVCQCFFNHFNSNTWRLAPH* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0758 948 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 907 - -
Vvi14g0758 948 Gene3D Ribonuclease Inhibitor 503 922 IPR032675 -
Vvi14g0758 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 405 IPR027417 -
Vvi14g0758 948 PRINTS Disease resistance protein signature 245 259 - -
Vvi14g0758 948 PRINTS Disease resistance protein signature 617 633 - -
Vvi14g0758 948 PRINTS Disease resistance protein signature 172 187 - -
Vvi14g0758 948 PRINTS Disease resistance protein signature 337 351 - -
Vvi14g0758 948 Coils Coil 434 454 - -
Vvi14g0758 948 SMART AAA_5 169 305 IPR003593 GO:0016887
Vvi14g0758 948 FunFam Probable disease resistance protein At1g61300 134 298 - -
Vvi14g0758 948 SUPERFAMILY L domain-like 464 904 - -
Vvi14g0758 948 Coils Coil 27 54 - -
Vvi14g0758 948 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Vvi14g0758 948 Gene3D - 304 393 IPR042197 -
Vvi14g0758 948 Gene3D - 140 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0758 Vvi-Chr14 11819414 11822260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0758 170 637 WRKY Transcription Factor Family AT5G45050 24.855 1.13e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0758 - - vvi:104881494 1828.14