Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0718 ATGGGTGGACCCCTTCATTGGGCAACACGTTTTGGAAGAGAAAAAATGGTTGTTGCACTTATAGCTTCTGGTGCATCAGTTGGGGCGGTGACAGATCCGAGTCCACAAGATCCCACTGGTAAAACTGCAGCATCCATTGCTTCTACAAGCGGGCATAAAGAACTTGTTGGTTATCTTTCTGAGGTGGTAGTAACTAGCCATATGTCATCCCTCATGCTGGAAGAAAGTGAGCTTTCAAAAGGGTCTGCTGAGGTGGAAGCAGAAATTACTACAAATAGTACCTCAAAAGGGAGCGTTGCTGCTAGTAAGGATCAGATTTCACTTAAAGATGCCTTGGCTGCATTTCGGAATACAACTCAGGCAGCTGCACGCATACAAGCTGCTTTTCACACACATTCTTTCAGGCGGAAGCAACAAAGAGAAGGCTGCCACTTTGTCTTCAAGGATGAGGCTTCCACTTCGTCTTTAAAAGGGAAGGATCCTGATTTTTGA 492 0.4553 MGGPLHWATRFGREKMVVALIASGASVGAVTDPSPQDPTGKTAASIASTSGHKELVGYLSEVVVTSHMSSLMLEESELSKGSAEVEAEITTNSTSKGSVAASKDQISLKDALAAFRNTTQAAARIQAAFHTHSFRRKQQREGCHFVFKDEASTSSLKGKDPDF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0718 163 Gene3D - 3 62 IPR036770 -
Vvi14g0718 163 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 4 158 - -
Vvi14g0718 163 SUPERFAMILY Ankyrin repeat 4 62 IPR036770 -
Vvi14g0718 163 ProSiteProfiles Ankyrin repeat profile. 1 32 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0718 Vvi-Chr14 10571972 10572463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0718 5 141 CAMTA Transcription Factor Family AT1G67310 67.883 3.16e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0718 K21596 - vvi:100260828 218.009