Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0715 ATGGTGGTTACGTGGAAAGTGACTCTTGCCCTAGCTATTGGTTGCATAGCAATACTAAAACCATATGAGTTAGCTTCTGCGATTTGTTTAGAGTTGGTTGATGTGTGTATAAAAGTGGGTATGCCACCTAGCGTCCTTAATATTCTGACAGGCCTAGGCTCTGAAGTTGGTGCTCCATTGGTATCTCACCCCCATGTTGACAAGATTGCATTTACTGAAAGCATTGTTACAAGGAGCAAGATCATGACAGTTGGAACTCAATTGATGAAGCCGGTTCCATTGGAGCTTGGTGGAAAGAGTCTCATTCTTGTATTTAAGGATGTCAACCTTAACAAGGCTGCTGAATGGACCGCCTTTGGTTGTTTTTAG 369 0.4282 MVVTWKVTLALAIGCIAILKPYELASAICLELVDVCIKVGMPPSVLNILTGLGSEVGAPLVSHPHVDKIAFTESIVTRSKIMTVGTQLMKPVPLELGGKSLILVFKDVNLNKAAEWTAFGCF* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0715 122 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 98 122 IPR016163 GO:0016620
Vvi14g0715 122 Pfam Aldehyde dehydrogenase family 1 122 IPR015590 GO:0016491
Vvi14g0715 122 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 97 IPR016162 GO:0016491
Vvi14g0715 122 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 3 122 - -
Vvi14g0715 122 SUPERFAMILY ALDH-like 1 122 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0715 Vvi-Chr14 10549103 10549471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0715 1 122 Aldehyde Dehydrogenase Gene Family AT1G74920 65.574 2.42e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0715 K00130 - vvi:100246770 189.119