Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0710 ATGAGGATAATGATAAAGGGAGGCGTGTGGAAGAACACAGAGGATGAAATTCTGAAAGCGGCGGTGATGAAGTATGGGAAGAACCAGTGGGCCAGGATCTCTTCTCTTCTCGTTCGCAAATCGGCCAAGCAGTGCAAGGCTCGCTGGTACGAGTGGCTTGACCCTTCTATCAAGAAGACTGAATGGACCAGAGAAGAAGATGAGAAACTACTTCATCTTGCCAAGCTCATGCCAACACAATGGAGAACAATTGCTCCCATTGTTGGACGTACTCCTTCTCAGTGCCTTGAGCGTTATGAAAAGCTCCTTGATGCAGCCTGTGTCAAGGATGAGAACTACGAACCCGGAGATGACCCGCGTAAACTGCGTCCTGGAGAGATTGACCCAAACCCAGAATCAAAGCCTGCCCGTCCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGCTTTCAGAAGCTCGAGCTCGGTTAGCCAACACGAGAGGTAAGAAGGCCAAAAGAAAAGCTAGAGAAAAGCAGCTTGAAGAAGCCAGGAGGCTCGCGTCTTTGCAGAAAAGGAGAGAACTTAAGGCTGCTGGAATTGATGGTAGACATCGTAAGAGGAAAAGGAAAGGAATAGATTACAATGCGGAAATCCCCTTTGAGAAGAAGCCACCTCCAGGCTTTTTTGATGTCACTGATGAAGAAAGGCTAGTTGAGCAGCCCAAGTTTCCTACCACCATTGAAGAACTTGAAGGCAAAAGAAGGGTTGATGTAGAAGCACAATTAAGAAAACAGGATGTTGCAAAGAATAAAATTGCACAAAGACAAGATGCCCCATCAGCTATATTGCAAGCCAATAAGATGAATGACCCAGAAACAGTTAGGAAAAGGTCAAAACTGATGCTTCCTGCCCCACAGATTTCAGACCATGAGTTAGAGGAAATTGCAAAGATGGGTTATGCTAGCGATCTTCTTGCTGGGAACGAGGAGCTCACAGAAGGGAGTGGGGCAACACGTGCTCTTCTTGCAAATTATTCCCAGACACCACGACAGGGGATGACTCCTTTACGAACCCCACAAAGAACACCGGCTGGTAAGGGTGATGCTATCATGATGGAAGCAGAAAACTTAGCTAGATTGAGAGAATCACAGACACCATTATTAGGAGGAGAAAATCCTGAGTTGCACCCTTCAGATTTTTCAGGGGTCACCCCCAAAAGAAGGGACGTCCAAACGCCAAATCTAATGCTGACTCCTTCTGCGACTCCTGGAGGTGTGGGCTCGACTCCTAGAATTAGCATGACTCCATCAAGGGATGCCCATTCTTTTGGTATAACCCCAAAAGGAACTCCCATTAGAGATGAGCTCCACATTAATGAAGATATGGATATGCATGATAGTGCAAAACTTGAGCTCCGGAGGCAGGCTGATCTAAGAAGGAACTTACGTTCTGGTTTAGGCAGTCTTCCACAGCCCAAGAATGAGTACCAAGTAGTTATCCAACCTATTCCAGAAGATAATGAAGAACCAGAGGAGAAGATAGAAGAAGATATGTCTGATAGGCTAGCTAGAGAAAGGGCTGAGGAGGAAGCCAGGCAGCAGGCATTACTTAGGAAGAGATCAAAAGTACTGCAGAGAGAGCTCCCTAGACCTCCTGTTGCTTCATTAGACCTCATTAGAAATTCTCTGATGAGGGCTGATGAAGACAAGAGTTCCTTTGTTCCTCCTACGTTGATTGAGCAGGCTGATGAAATGATAAGAAAGGAGCTGCTTGGCTTACTTGAGCATGATAATGCAAAGTATCCACTTGATGAAAAAACAGAGAAGGAGAAAAAGAAAGGAGGCAAGCGCTCTGCAAATGGAAAATCTGCTGGTTCTGTCCCTGACATAGAAGATTTTGAAGAAGCTGAACTAAAAGAGGCTGACAATTTGATAAAGGAGGAAGTTCAGTTTCTCCGTGTGGCAATGGGACATGATAACGAATCACTTGATGAATTTGTTGAGGCACACAAAACATGCTTAAATGACCTGATGTACTTCCCTACTCGTGATGCTTATGGTCTGTCAAGTGTTGCTGGAAACATGGAGAAACTTGCAGCCCTGCAGAATGAATTTGACAATGTGAAAAAGAGGATGGAGGATGATACTAAGAAGGCACAACGCCTTGAGCAGAAGATAAAACTTCTTACGCATGGTTATCAGATGCGGGCTGGAAAACTGTGGACACAAATTGAGGCAACTTTCAAACAGATGGACACTGCTGGAACAGAACTTGAGTGTTTCCAAGCTTTGCAAAAACAAGAGCAACTAGCAGCATCACACAGGATCAATGGTCTTTGGGAGGAAGTTCAGAAGCAGAAGGAGCTTGAACAGACTTTACAGAGTCGCTATGGGGATCTTATTGCAGAGCAGGAAAGAATCCAATCTCTCATTAATGAATACAGAGTACAAGCAAAAATTCAAGAAGAAATTGCGGCAAAGAATCATGCTCTTGAGTTGGCTGAGGCTGAAATGTGCCAAATGGATGTAGAAAATCCTGAGCCTGCAGCTGCAGATGAGCTTGGGAACTCTGTGCAAGTTGATCCATCTCATGGTGGATTGCCAGACCAGAAAATGGATTCCAGCCAAGAAGAATATCATACAAGCCCAAAACATGATGCAGATGCTGATGCAGATGCAGCTAATCATATTACTGTGGCTGGCTTGGAAACTCCTGATGCTGTAGCCGCTTCAGATGTGCTTGGAAATTCCTTTCCAGCTGATCCATCTCATGATGAAATGCCAGGCCAGAAACTGGATGCTGCTGAAGGGGAAGCTCATGCATCCCCAAATCCTGATGTGAATGTTGGTGCAGAAAATGAAACAATTGTACCAGACACAGAAACTGCTGAGCCTGTATGCCCGTCAGATGAGCTTGGAAAATCTATGCCAGTTGGCTCATCTCGTGATGGAACTCCAAATGATCAAATGGGTGCTGTCCAAGCAGAAGCTTATGCAAGTACAAAACTTGATGGGGATGTTGGTGCAGAGGCCCAAGATGGTGGAGGATCGTAG 3039 0.4531 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDGRHRKRKRKGIDYNAEIPFEKKPPPGFFDVTDEERLVEQPKFPTTIEELEGKRRVDVEAQLRKQDVAKNKIAQRQDAPSAILQANKMNDPETVRKRSKLMLPAPQISDHELEEIAKMGYASDLLAGNEELTEGSGATRALLANYSQTPRQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRRDVQTPNLMLTPSATPGGVGSTPRISMTPSRDAHSFGITPKGTPIRDELHINEDMDMHDSAKLELRRQADLRRNLRSGLGSLPQPKNEYQVVIQPIPEDNEEPEEKIEEDMSDRLARERAEEEARQQALLRKRSKVLQRELPRPPVASLDLIRNSLMRADEDKSSFVPPTLIEQADEMIRKELLGLLEHDNAKYPLDEKTEKEKKKGGKRSANGKSAGSVPDIEDFEEAELKEADNLIKEEVQFLRVAMGHDNESLDEFVEAHKTCLNDLMYFPTRDAYGLSSVAGNMEKLAALQNEFDNVKKRMEDDTKKAQRLEQKIKLLTHGYQMRAGKLWTQIEATFKQMDTAGTELECFQALQKQEQLAASHRINGLWEEVQKQKELEQTLQSRYGDLIAEQERIQSLINEYRVQAKIQEEIAAKNHALELAEAEMCQMDVENPEPAAADELGNSVQVDPSHGGLPDQKMDSSQEEYHTSPKHDADADADAANHITVAGLETPDAVAASDVLGNSFPADPSHDEMPGQKLDAAEGEAHASPNPDVNVGAENETIVPDTETAEPVCPSDELGKSMPVGSSRDGTPNDQMGAVQAEAYASTKLDGDVGAEAQDGGGS* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 596 627 - -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 596 612 - -
Vvi14g0710 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Vvi14g0710 1012 Coils Coil 812 832 - -
Vvi14g0710 1012 Gene3D - 60 114 - -
Vvi14g0710 1012 Coils Coil 514 534 - -
Vvi14g0710 1012 Coils Coil 167 187 - -
Vvi14g0710 1012 SMART sant 58 105 IPR001005 -
Vvi14g0710 1012 SMART sant 6 55 IPR001005 -
Vvi14g0710 1012 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Vvi14g0710 1012 Pfam pre-mRNA splicing factor component 407 659 IPR021786 -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 907 1012 - -
Vvi14g0710 1012 Coils Coil 686 720 - -
Vvi14g0710 1012 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 850 883 - -
Vvi14g0710 1012 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 806 IPR047242 GO:0000398|GO:0000974
Vvi14g0710 1012 Gene3D - 5 59 - -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 400 435 - -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 113 150 - -
Vvi14g0710 1012 FunFam CDC5 cell division cycle 5-like 60 120 - -
Vvi14g0710 1012 CDD SANT_CDC5_II 55 106 IPR047240 -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 866 883 - -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 381 447 - -
Vvi14g0710 1012 MobiDBLite consensus disorder prediction 341 360 - -
Vvi14g0710 1012 Pfam Myb-like DNA-binding domain 10 70 - -
Vvi14g0710 1012 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Vvi14g0710 1012 FunFam CDC5 cell division cycle 5-like 5 59 - -
Vvi14g0710 1012 CDD SANT 10 53 IPR001005 -
Vvi14g0710 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0710 Vvi-Chr14 10271962 10295806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0710 1 829 MYB-Related Transcription Factor Family AT1G09770 77.925 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vvi14g0710 Myb_Cef 2.2e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0710 K12860 - vvi:100243262 1939.08