Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0704 ATGTCAGAAGCGTTGAAGAGAGATTACCAACTGTGCGAGGAGATCGGTCGGGGACGATTCGGCACTGTTTTCCGGTGCTTTTCCCCCGTCGCTGAAGAATTTTTCGCCTGCAAATCCATCAACAAGCGAGCTCTATCCGACCCCGTCGACCGGGAGTGTCTGGAGAAGGAGCCCAAGGTGATGTCTTTACTCGCTCCTCACCCTCACATTCTTCAGATCGTCGGGATCTATGAAGATGAAGCCAGTCTTCACATGGTCATGGAGCTCTGTGATTCCTCCGATCTTTTCGCTCGAATCAACAATCAAGGGTTCTTTCATGAATCGGAGGCGGCTTCTGTGATGAAGCCGTTGCTGGAGGCTATCGCGCATTGTCACCGTAACGGCGTCGCTCACCGGGATATCAAGCCGGATAATGTGATGTTTGACTCGCGGCAGAGGCTGAAACTGGCAGATTTTGGGTCAGCGGAGTGGTGCGGAGAGGGAAGGGGGATGAAAGGAGTCGTCGGCACGCCGTACTATGTGGCGCCGGAAGTGCTTTCCGGCATTGAGTACACTGAGAAAGTGGACGTGTGGAGCGCCGGAGTGATTTTGTACGTAATGTTGGCGGGAGTTCCTCCTTTTTACGGCGACTCCGCGGCGGAGATATTCGAGGCGGTTCTGAGGGGGAATTTGAGGTTTCCGACGAGAATCTTCAGGACGGTGTCACCGGCGGCGAAAGATTTGCTCAGGAAGATGATCTGTAAGGATGTTTCAAGGCGATTGTCGGCGGAACAGGCACTGAGACACCCATGGATCACAAACGGAGGAGAGATCTGA 816 0.538 MSEALKRDYQLCEEIGRGRFGTVFRCFSPVAEEFFACKSINKRALSDPVDRECLEKEPKVMSLLAPHPHILQIVGIYEDEASLHMVMELCDSSDLFARINNQGFFHESEAASVMKPLLEAIAHCHRNGVAHRDIKPDNVMFDSRQRLKLADFGSAEWCGEGRGMKGVVGTPYYVAPEVLSGIEYTEKVDVWSAGVILYVMLAGVPPFYGDSAAEIFEAVLRGNLRFPTRIFRTVSPAAKDLLRKMICKDVSRRLSAEQALRHPWITNGGEI* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0704 271 PIRSF ILK 3 260 - -
Vvi14g0704 271 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 268 - -
Vvi14g0704 271 Pfam Protein kinase domain 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0704 271 ProSiteProfiles Protein kinase domain profile. 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0704 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Vvi14g0704 271 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Vvi14g0704 271 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vvi14g0704 271 SMART serkin_6 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0704 271 Gene3D Transferase(Phosphotransferase) domain 1 2 270 - -
Vvi14g0704 271 CDD STKc_CAMK 8 264 - -
Vvi14g0704 271 SUPERFAMILY Protein kinase-like (PK-like) 7 267 IPR011009 -
Vvi14g0704 271 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0704 Vvi-Chr14 10040315 10041574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0704 3 270 EF-hand Containing Proteins AT1G50700 42.435 2.24e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vvi14g0704 Pkinase 6.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0704 - K08794 vvi:100253505 553.132