Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0694 ATGTTCGTATCACCGGAAAAGCCAAAGGGGCAACAGGAGCCATGTGGCAAAGAAGCGTTCCAACTCCTATATCCCCTTCTCTCTTTTTATACATTCATGGAGGCCTTAAGGGATGCCGATATCAACAGGATCGGGGTATGGGGGATGGGTGGTGTCGGGAAGTCCACGCTGGTGAAACGAGTGGCTGAAGAAGCCGAACAAGAGGAGTTATTCCACAAGGTGGTCACGGCATCTGTGTTCCAGACTCCAGACTACAAAGAAATTCAACAACAAATTGCAGAAAAACTAGGTATGAAATTTGAGGAAGTGAGTGAACAGGGACGAGCAGGTCGATTACATCAGAGGATCAAGCAAGAGAATACCATCCTCATCATCTTGGATGATCTTTGGGCCGAACTTGAGTTGGAGAAAGTAGGAATTCCTTCGCCAGATGATCACAAGGGATGCAAATTAGTGCTAACTTCTAGAAATAAACAGGTCTTGTCGAATGAGATGAGTACTCAAAAAGATTTTCGAGTTCAACATTTGCAAGAAGATGAAACATGGATTTTATTTAAGAACACAGCTGGCGATTCCATTGAAAATCCAGAGTTGCAACCAATAGCTGTTGATGTAGTAAAAGAATGCGCGGGTTTGCCAATTGCAATAGTAACTGTGGCAAAGGCATTGAAAAACAAGAATGTGTCTATTTGGAAGGATGCCCTGCAACAACTGAATTCGCAAACCTCGACAAACATAACAGGAATGGAGACAAAGGTTGCATTCCCAAATTTGGAGGAATTAGAATTGGGTCTCAACAGAGATACAGAAATATGGCCAGAGCAATTTCCAGTGGATTCCTTTCCCAGACTAAGAGTACTGGATGTATGTGAAGATAGAGATATTTTGGTTGTGATTCCTTCCTTTATGCTTCAAATATTACATAATCTGGAAGTACTTAATGTAGGAAGATGTAGTTCAGTCAACGAGGTATTCCAACTTGAAGGACTTGACGAGGAAAATCAAGCCAAGAGGCTTGGACGGTTAAGAGAAATAGAGTTGTATGATCTTCCTGGGCTGACACATTTGTGGAAGGAAAACTCCAAACCAGGCCTTGACTTGCAGGGTCTAGAGAGTCTTGTAGTACGACACTGTGTCAGTTTGATAAATTTGGTACCATCCTCGGTATCTTTCCAGAATCTAGCTACTCTAGATGTGCAGTCTTGTGGTAGTCTGAGAAGTTTGATATCACCCTCGGTAGCTAAAAGTCTGGTAAAACTCAAAACACTCAAAATAGGTGGATCAGATATGATGGAAGAAGTAGTTGCCAACGAAGGAGGGGAAGCAACAGATGAGATTACTTTCTACAAATTACAACACATGGAGCTTCTGTATTTGCCAACTTGTGAATCAATTCAAGCATGCCAAATGATGGAGGAGCTACTTGGACAAGTTATGGCAAAGCTTTTGGAAGCTCAAATTCATGAAGAACCAAGCTTTGGAGCTCCATAG 1491 0.4219 MFVSPEKPKGQQEPCGKEAFQLLYPLLSFYTFMEALRDADINRIGVWGMGGVGKSTLVKRVAEEAEQEELFHKVVTASVFQTPDYKEIQQQIAEKLGMKFEEVSEQGRAGRLHQRIKQENTILIILDDLWAELELEKVGIPSPDDHKGCKLVLTSRNKQVLSNEMSTQKDFRVQHLQEDETWILFKNTAGDSIENPELQPIAVDVVKECAGLPIAIVTVAKALKNKNVSIWKDALQQLNSQTSTNITGMETKVAFPNLEELELGLNRDTEIWPEQFPVDSFPRLRVLDVCEDRDILVVIPSFMLQILHNLEVLNVGRCSSVNEVFQLEGLDEENQAKRLGRLREIELYDLPGLTHLWKENSKPGLDLQGLESLVVRHCVSLINLVPSSVSFQNLATLDVQSCGSLRSLISPSVAKSLVKLKTLKIGGSDMMEEVVANEGGEATDEITFYKLQHMELLYLPTCESIQACQMMEELLGQVMAKLLEAQIHEEPSFGAP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0694 496 Gene3D - 28 171 IPR027417 -
Vvi14g0694 496 Gene3D - 175 259 IPR042197 -
Vvi14g0694 496 PRINTS Disease resistance protein signature 389 405 - -
Vvi14g0694 496 PRINTS Disease resistance protein signature 209 223 - -
Vvi14g0694 496 PRINTS Disease resistance protein signature 43 58 - -
Vvi14g0694 496 PRINTS Disease resistance protein signature 116 130 - -
Vvi14g0694 496 Pfam NB-ARC domain 39 244 IPR002182 GO:0043531
Vvi14g0694 496 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 253 475 - -
Vvi14g0694 496 SUPERFAMILY L domain-like 243 470 - -
Vvi14g0694 496 FunFam Probable disease resistance protein At1g61300 28 170 - -
Vvi14g0694 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 248 IPR027417 -
Vvi14g0694 496 Gene3D Ribonuclease Inhibitor 296 482 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0694 Vvi-Chr14 9701598 9707217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0694 40 226 WRKY Transcription Factor Family AT5G45050 26.768 8.31e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0694 - - vvi:104881526 439.884