Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0674 ATGGTAGAAATTGTTCTTTCGGTTGCAGCAAAAGTTTCAGAGTACCTGGTTGATCCAGCTGTACGTCAGCTGGGTTATCTGTTTAACTACCGTGCCAACATTGAGGACCTCTCTCAACAGGTTGAGAAGCTGAGGGATGCCAGGGCTAGGCTGCAGCACTCTGTGGATGAAGCTATTGGGAATGGACATATAATCGAAGATGATGTTTGCAAGTGGATGAAACGTGCTGATGGGTTCATACAAAATGCTTGCAAATTTCTTGAAGATGAGAAGGAGGCGCGGAAGAGTTGTTTCAATGGGTTGTGTCCTAATTTGAAGTCCCGGTACCAGCTAAGCAGGGAAGCAAGGAAGAAGGCAGGGGTTTCTGTTCAAATCCTTGGAGATGGCCAATTTGAGAAGGTAGCATATCGTGCCCCTCTGCAAGGGATAAGGTGCAGACCTTCCGAAGCTTTAGAATCAAGAATGTTGACTTTGAATGAAGTCATGGAGGCCTTAAGGGATGCCAAGATCAACAAGATCGGGGTATGGGGGTTGGGCGGTGTCGGGAAGACCACGCTGGTGAAACAAGTGGCTGAACAAGCTGCTCAAGAGAAGTTATTCGAAAAGGTGGTCACGGCAGCTGTGTTAGAGACTCCAGACTTAAAAAAAATTCAAGGGGAACTTGCAGACCTTCTAGGTATGAAATTTGAGGAGGAGAGTGAACAGGGAAGAGCAGCTCGACTATATCAGAGGATGAACGAGATTAAGACCATCCTCATCATCTTGGATGATATTTGGGCGAAACTTGACTTGGAGAAAATAGGAATTCCTTCTCCAGATCACCACAAAGGATGCAAATTAGTGCTAACTTCTAGAAATGAACACATCTTGTCCAATGAGATGGATACTCAAAAGGATTTTCGAGTTCAACCTTTGCAAGAAGATGAAACATGGATTTTATTTAAGAACACAGCTGGTTCCATTGAAAATCCAGAGTTGCAACCTATAGCTGTTGATGTAGCAAAAGAATGCGCGGGTTTGCCACTTGCAATAGTAACTCTGGCAACGGCATTGAAAGGCGAGAAGAGTGTGTCCATTTGGGAGGATGCCCGGCTACAACTGAAATCGCAAACCTCGACTAACGTAACAGGACTGACAACAAATGTATACTCAAGTCTGAAGTTGAGCTACGAACACTTGAAGGGAGTTGAGGTGAAGTCATTTTTCTTGCTTTGTGGTTTAATTTCTCAAAATGATATTCATATATGGGACTTGTTGAAATATGGTGTGGGTCTGCGATTATTTCAAGGAACTAATACATTGGAAGAGGCGAAAAATAGAATAGATACATTGGTTGGCAACCTCAAATCCTCAAATTTTTTACTAGAAACTGGCCATAATGCAGTTGTTAGAATGCATGATCTTGTTCGGAGTACTGCCAGAAAAATTGCATCCGATCAACATCATATGTTTACACTCCAGAATACTACTGTTAGAGTGGAAGGATGGCCAAGGATAGATGAACTCCAGAAGGTCACCTGGGTAAGTCTGCATGACTGTGATATTCGTGAACTTCCAGAAGGGCTGGTATGTCCAAAACTTGAACTTTTTGGATGTTATGATGTAAACACCAATTCGACAGTGCAAATCCCAAACAATTTTTTTGAAGAGATGAAGCTATAG 1662 0.4284 MVEIVLSVAAKVSEYLVDPAVRQLGYLFNYRANIEDLSQQVEKLRDARARLQHSVDEAIGNGHIIEDDVCKWMKRADGFIQNACKFLEDEKEARKSCFNGLCPNLKSRYQLSREARKKAGVSVQILGDGQFEKVAYRAPLQGIRCRPSEALESRMLTLNEVMEALRDAKINKIGVWGLGGVGKTTLVKQVAEQAAQEKLFEKVVTAAVLETPDLKKIQGELADLLGMKFEEESEQGRAARLYQRMNEIKTILIILDDIWAKLDLEKIGIPSPDHHKGCKLVLTSRNEHILSNEMDTQKDFRVQPLQEDETWILFKNTAGSIENPELQPIAVDVAKECAGLPLAIVTLATALKGEKSVSIWEDARLQLKSQTSTNVTGLTTNVYSSLKLSYEHLKGVEVKSFFLLCGLISQNDIHIWDLLKYGVGLRLFQGTNTLEEAKNRIDTLVGNLKSSNFLLETGHNAVVRMHDLVRSTARKIASDQHHMFTLQNTTVRVEGWPRIDELQKVTWVSLHDCDIRELPEGLVCPKLELFGCYDVNTNSTVQIPNNFFEEMKL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0674 553 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Vvi14g0674 553 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 22 552 - -
Vvi14g0674 553 FunFam Probable disease resistance protein At1g61300 137 298 - -
Vvi14g0674 553 Coils Coil 148 168 - -
Vvi14g0674 553 Coils Coil 27 61 - -
Vvi14g0674 553 SMART AAA_5 169 305 IPR003593 GO:0016887
Vvi14g0674 553 Gene3D - 304 393 IPR042197 -
Vvi14g0674 553 Gene3D - 141 303 IPR027417 -
Vvi14g0674 553 PRINTS Disease resistance protein signature 245 259 - -
Vvi14g0674 553 PRINTS Disease resistance protein signature 172 187 - -
Vvi14g0674 553 PRINTS Disease resistance protein signature 337 351 - -
Vvi14g0674 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0674 Vvi-Chr14 9382342 9384003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0674 170 476 WRKY Transcription Factor Family AT5G45050 26.101 7.11e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0674 - - vvi:104881504 1041.57