Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0655 ATGGCGAACCGGTGGTGGGCTGGGCAGGTGGGTCTGCAAGGTGTAGATACCTCATCAGCTTCACCTGCAATGAAGAAACCAGATCTGGGAATATCCATGAATGAAAATGGAGGAAGCGGGAGCGGAGGCGGAGGAGAGGAAGAAGAGGAAAAAGAAAACAGTGATGAGCCCAGAGAGGGTGCAATTGAGGTGGCTACGCGCAGGCCTAGGGGCCGGCCGCCTGGCTCCAAGAACAAGCCAAAACCTCCGATTTTTGTGACAAGGGACAGCCCTAACGCTCTGCGCAGCCACGTTATGGAGGTGGCAAACGGCTCCGACATCACAGAAAGCATAGCCCAATTCGCGAGAAGGCGGCAACGAGGCGTCTGCGTGCTCAGCGCAAGTGGGACAGTCATGAACGTAACGCTTCGCCAGCCTTCTGCCCCTGGTGGTGCAGTTATGGCACTTCATGGCCGATTCGAAATTCTTTCCTTAACCGGCGCGTTCCTACCGGGACCAGCGCCACCAGGCTCCACTGGACTAACCATATACCTAGCAGGCGGTCAAGCTCAGGTCGTGGGTGGTAGCGTGGTGGGTTCACTCATAGCGGCAGGTCCAGTTATGGTGATTGCAGCTACCTTTTCGAATGCAACCTACGAGAGGCTCCCCCTAGAAGACGAAGAAGAGGCGGGCAGCGCAGCACAGGAGCAGCTCGCTGGCGGCGGAGGCGGTGGTGGGTCACCGCCAGGGATTGGCGGCAGTGGGGGGCAGCAGCAGGCAGGGATGGCAGATCCTTCCTCCATGCCGGTTTATAATTTGCCACCAAATTTGCTTCCAAATGGTGGACAACTGAACCATGATGCTTATGGTTGGGCACATGGGCGCCAGCCTTACTAG 876 0.5742 MANRWWAGQVGLQGVDTSSASPAMKKPDLGISMNENGGSGSGGGGEEEEEKENSDEPREGAIEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDITESIAQFARRRQRGVCVLSASGTVMNVTLRQPSAPGGAVMALHGRFEILSLTGAFLPGPAPPGSTGLTIYLAGGQAQVVGGSVVGSLIAAGPVMVIAATFSNATYERLPLEDEEEAGSAAQEQLAGGGGGGGSPPGIGGSGGQQQAGMADPSSMPVYNLPPNLLPNGGQLNHDAYGWAHGRQPY* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0655 291 ProSiteProfiles PPC domain profile profile. 91 230 IPR005175 -
Vvi14g0655 291 MobiDBLite consensus disorder prediction 218 291 - -
Vvi14g0655 291 MobiDBLite consensus disorder prediction 1 91 - -
Vvi14g0655 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 221 - -
Vvi14g0655 291 PIRSF ESCAROLA 9 291 IPR014476 GO:0003680
Vvi14g0655 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 287 IPR014476 GO:0003680
Vvi14g0655 291 Gene3D - 94 224 - -
Vvi14g0655 291 FunFam AT-hook motif nuclear-localized protein 94 222 - -
Vvi14g0655 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 209 IPR005175 -
Vvi14g0655 291 CDD DUF296 95 207 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0655 Vvi-Chr14 9004161 9005036 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0655 1 291 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.258 4.65e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0655 - - vvi:100244453 464.151