Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0651 ATGGAACCCAATGATACCAGACTGACGTCTTACTTCCACCACCACCAGCAACAGCCACAGCCGCCGCCTCCTCCACCACCGCAGCCTCAACCCCACCACCAAACTCAAAACCCTGTCGCCGCCACTGCTGCTTCCCCCTCCAACGGCCTTCTTCCACCCTCCGAAAGGCCCCCTCTGGGGTACCACCACTCGGTGCCTTCGGCGGTTACGTCCCCGCCGGAGACCGTGAGGAGGAAGAGGGGGAGGCCTAGAAAGTATGGAACTTCAGAACAGGGTCTGAGTGCGAAGAAATCGCCTTCGTCATCGGTGCCAGTGCCGAAGAAGAAAGAGCAGGGCTTGGGAGGGTCTTCCAAGAAGTCCCAGTTGGTTTCTTTAGGCAATGCAGGGCAGAGTTTTACACCACATGTTATTACTGTGGCATCTGGAGAGGATGTTGCCCAGAAAATTATGTTCTTCATGCAACAAAGCAAGCGCGAAATATGTATTATGTCTGCATCTGGCTCGATATCTAATGCATCTCTTCGCCAGCCAGCCACATCAGGAGGCAATGTTGCATATGAGGGACGGTTTGAAATCCTTTCACTCACTGGATCTTATGTCCGTACTGAGATTGGAGGAAGAACTGGTGGGCTGAGTGTATGTCTGTCTAATACAGATGGCGAAATTATTGGTGGTGGCGTTGGTGGACCCCTAAAGGCCGCAGGCCCAGTTCAGGTTATCGTTGGCACCTTTCTAGTTGACTCCAAGAAAGATACCAGTACCGGTTTAAAAGCTGATGCTTCTCCCAAGTTTACATCACCAGTTGGTGGGGCATCTGTATCAAATGTAGGGTTTCGATCTGCAGTTGAATCTTCTGGAAGGATCCCAGTCATGGGGAACGATGATCATCAAGGCATCGGTGGAAGTCATTTCATGATTCAGTCTCGGGGTATGCAAATGGCACCTACACGGCCCACTGACTGGAGGAGTGGCCCTGATGCTAGAATCAATGTTGGCTATGATTTGGCAGGAAGAGGAGGACGTGGAGCATGCCAATCTCCAGAAAATGGGGACTATGAGCAGATTCCTGATTAG 1074 0.5168 MEPNDTRLTSYFHHHQQQPQPPPPPPPQPQPHHQTQNPVAATAASPSNGLLPPSERPPLGYHHSVPSAVTSPPETVRRKRGRPRKYGTSEQGLSAKKSPSSSVPVPKKKEQGLGGSSKKSQLVSLGNAGQSFTPHVITVASGEDVAQKIMFFMQQSKREICIMSASGSISNASLRQPATSGGNVAYEGRFEILSLTGSYVRTEIGGRTGGLSVCLSNTDGEIIGGGVGGPLKAAGPVQVIVGTFLVDSKKDTSTGLKADASPKFTSPVGGASVSNVGFRSAVESSGRIPVMGNDDHQGIGGSHFMIQSRGMQMAPTRPTDWRSGPDARINVGYDLAGRGGRGACQSPENGDYEQIPD* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0651 357 MobiDBLite consensus disorder prediction 337 357 - -
Vvi14g0651 357 MobiDBLite consensus disorder prediction 17 33 - -
Vvi14g0651 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 21 268 IPR039605 GO:0003680
Vvi14g0651 357 MobiDBLite consensus disorder prediction 91 105 - -
Vvi14g0651 357 MobiDBLite consensus disorder prediction 1 16 - -
Vvi14g0651 357 MobiDBLite consensus disorder prediction 34 49 - -
Vvi14g0651 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 249 - -
Vvi14g0651 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 244 IPR005175 -
Vvi14g0651 357 CDD DUF296 133 244 IPR005175 -
Vvi14g0651 357 ProSiteProfiles PPC domain profile profile. 129 265 IPR005175 -
Vvi14g0651 357 MobiDBLite consensus disorder prediction 1 121 - -
Vvi14g0651 357 Gene3D - 134 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0651 Vvi-Chr14 8848697 8872086 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0651 61 357 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 54.740 1.39e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0651 - - vvi:100261576 656.366