Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0606 ATGGATATTGTTGGAATAAGTGAAAAGGAACAGGAAGCAATCTTCAGAGTTGTTGCTTCAATTCTCCATATCGGCAACATTGAATTTACTAAGGGAAAGGAAGTTGATTCTTCAGTTCCAAAAGATGACAAGGCAAAATTCCATCTTAAAATGACAGCAGAGCTTCTAATGTGTGACCCTCTGGCCTTGGAAGATGCATTATGTAAACGTGTCATGATCACCCCCGAAGAAGTTATAAAGCGAAGTCTTGATCCTCTTGCTGCAACAGTTAGCAGGGATGGTTTTGCTAAGACAATATATTCTCGATTGTTTGACTGGTTGGTGGATAAAATTAATGTCTCAATTGGACAAGATCCTAATTCAAAATCTCTTATTGGGGTCCTTGACATCTACGGTTTTGAAAGCTTTAAGACTAACAGTTTTGAGCAATTCTGCATTAATTTCACAAATGAGAAGCTGCAGCAACATTTTAACCAGCATGTCTTCAAGATGGAACAAGAAGAATATACAAAAGAAGAAATTGATTGGAGCTACATTGAATTTGTTGATAATCAAGATGTCCTGGATCTCATTGAAAAGAAACCCGGTGGAATCGTTGCTCTCCTAGATGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTCTCACAGAAGCTTTATCAGACATTTAAAGTTCACAAGCGCTTTATCAAGCCAAAACTATCTCGCACAGATTTCACTATTTCTCATTATGCTGGGGAGGTCCTATATCAATCTGACCAATTTTTAGACAAAAACAAAGACTATGTGGTTCCAGAACATCAAGACTTGTTGGGTGCTTCTAAATGTACTTTTGTAGCAGGCCTTTTCCCTCCACTCCCTGAAGAGTCTGCCAAATCTTCTAAGTTCTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAGCAATTGATGGACACATTAAACTCCACAGAACCTCACTACATCAGATGTGTAAAGCCAAACAACCTTCTAAAACCTGCCATATTTGAGAATGTCAATATCATGCAACAACTACGTTGTGGTGGTGTTTTAGAGGCCATCAGAATCAGTTGTGCTGGGTATCCTACACGCCGTCCTTTTTTTGAATTCCTAAATCGATTTGGAATTCTTGCTCAAGAAGTTTTAGAAGGGAACTATGATGAAAAGGTTGCATGCAGAAAGATTCTGGAGAAAAAGGGGCTTAAGGGGTTTCAGATAGGTAAGACAAAGGTTTTCTTACGCGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCAGAGGTACTTAGTAATGCAGCAAAGGCTATCCAAAGGCGTATACGGACTTATCATGCTCGCAAACGTTTTATTGCATTGCGAAAGGCTACCATTCATGTGCAATCTTTATGGAGAGGAATGCTGGCTTGCAAACTTTATGAGAGCATGAGAAGAGAGGCTGCTGCTGTGAAAATTCAGAAGAACATACGTAGACATGAAGCCAGAAAAACCTTTAACAAGCTTCGAGTATCAGTGCTTGTCTTGCAGACAGGCTTAAGAGCAATGGCTGCTCATAGAGAATTCAGATTTAGGAAGCAAACTAAAGCAGCAATTGTTATTCAGGCCCGGTGGCGCTGTCATAGAGCTTTCTCATTCTACAAGAAGCTCAAGAGAGGAGCAATAGTTTCACAATGCAGATGGAGGGGAAGAGTAGCCAAGAAAGAGCTCAGGAAGCTGAAAATGGCTGCAAGAGAAACAGGTGCACTTAAAGAAGCGAAGGACAAGCTCGAAAAAACAGTGGAGGATTTAACATGGCGTCTACAGTTGGAAAAGCGTTTAAGGACTGACTTAGAAGAAGCAAAAGCACAGGAGATAGCAAAATTGCAGAATTCTTTGCAAGCTATGCAAACCAAAGTTGATGAAACAAATGCATTACTTGTCAAGGAACGAGAGGCTGCAAGAAAGGCTATTGAAGAGGCACCACCTGTTATTAAAGAAACCCCAGTTATTGTTGAAGATACCAAAAAAGTTGAGTCTCTAACAGCAGAAGTGGAGAGCTTCAAGGCCTTGTTGCAGTCAGAAAAAGAAAGAGCTGACAATTCTGAGAAGAAATATACTGAAGCCCAAGAATCTAGTGAAGAAAGACATAAAAAATTAGAAGAAACAGAAAAAAAGGTTCAGCAACTCCAGGAATCATTGAGCAGGCTAGAGGAGAAGCTTACTAATTTAGAATCAGAAAATCAAGTTCTCCGTCAACAGGCTGTGTCCATGGCACCCAATAAGTTTCTTTCAGGACGCTCCAAATCAATTGTTCAGAGGAGTTCTGAAGGTGGTCATGTTGCAGGGGATGCAAGGACTTCTTTGGATCTGCATAGCCCTTCACTAAACCAAAGGGAGTTTTCTGAAGTAGAGGAGAAACCACAAAAATCACTCAATGAGAAGCAGCAGGAGAATCAGGAACTGCTCATTCGATGCATTGCACAACACTTAGGCTTTGCAGGAAGTAGACCAATTGCTGCCTGTATCATATACAAATGCCTCCTGCAATGGAGATCATTTGAAGTTGAACGGACTAGTGTTTTTGACCGGATTATCCAGACAATAGGCCAGGCTATTGAGACCCAGGATAACAATGACATTTTGGCCTACTGGTTATCCAATGCCTCAACTCTTCTGTTACTACTCCAGCGCACATTGAAAGCAAGTGGTGCAGCTGGAATGGCTCCACAGCGCCGTCGATCATCATCAGCTACATTGTTTGGAAGGATGACACAGAGTTTTCGTGGAGCTCCACAAGGAGTTAATCTTTCCTTCACAAATGGTGGTCTAACCGGTGGAGTGGAAACTTTACGCCAAGTTGAAGCCAAATACCCAGCGCTGCTTTTCAAACAGCAGCTTACAGCATATGTAGAGAAAATTTATGGAATGATTCGTGATAATCTGAAGAAAGAGATTTCTCCTTTACTGGGGTTGTGCATCCAGGCACCAAGAATATCAAGAGCAAGCTTAGTTAAGGGACCGTCACGTTCTGTTGCAAACACTGCAGCTCAACAAGCTTTGATTGCTCATTGGCAAGGGATTGTGAAGAGCCTTGGAAATTTCTTGAATACTTTGAAAGCAAATCATGTACCCCCATTTTTAGTTCGTAAGGTGTTCACACAAATATTTTCTTTCATCAATGTCCAATTATTCAACAGCCTTCTATTACGACGAGAGTGCTGTTCATTTAGTAATGGTGAATATGTTAAAGCAGGACTGGCTGAACTGGAACATTGGTGTTACAAGGCAACCGATGAGTATGCAGGTTCAGCTTGGGATGAGCTCAAGCATATCAGGCAGGCTATTGGGTTTCTGGTCATACATCAAAAGCCAAAGAAAACCCTTGATGAAATAAGCCATGACCTATGCCCGGTGCTCAGTATACAGCAGCTGTATCGGATCAGTACAATGTACTGGGATGACAAGTATGGCACGCATAGTGTGTCCCCAGATGTTATATCCAACATGAGGGTGTTGATGACTGAAGATTCGAACAATGCAGTCAGCAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCAGTTGATGATATATCAAAGTCTATGGAACAAATAGACATATCTGACATTGAACCACCACCACTTATTCGTGAGAATTCTGGCTTTAGTTTCTTGTTGCCGCGTGCTGATTAA 3678 0.4116 MDIVGISEKEQEAIFRVVASILHIGNIEFTKGKEVDSSVPKDDKAKFHLKMTAELLMCDPLALEDALCKRVMITPEEVIKRSLDPLAATVSRDGFAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSQKLYQTFKVHKRFIKPKLSRTDFTISHYAGEVLYQSDQFLDKNKDYVVPEHQDLLGASKCTFVAGLFPPLPEESAKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFLNRFGILAQEVLEGNYDEKVACRKILEKKGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKAIQRRIRTYHARKRFIALRKATIHVQSLWRGMLACKLYESMRREAAAVKIQKNIRRHEARKTFNKLRVSVLVLQTGLRAMAAHREFRFRKQTKAAIVIQARWRCHRAFSFYKKLKRGAIVSQCRWRGRVAKKELRKLKMAARETGALKEAKDKLEKTVEDLTWRLQLEKRLRTDLEEAKAQEIAKLQNSLQAMQTKVDETNALLVKEREAARKAIEEAPPVIKETPVIVEDTKKVESLTAEVESFKALLQSEKERADNSEKKYTEAQESSEERHKKLEETEKKVQQLQESLSRLEEKLTNLESENQVLRQQAVSMAPNKFLSGRSKSIVQRSSEGGHVAGDARTSLDLHSPSLNQREFSEVEEKPQKSLNEKQQENQELLIRCIAQHLGFAGSRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGQAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSFTNGGLTGGVETLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRISRASLVKGPSRSVANTAAQQALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRAD* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0606 1225 MobiDBLite consensus disorder prediction 791 806 - -
Vvi14g0606 1225 Coils Coil 611 638 - -
Vvi14g0606 1225 ProSiteProfiles IQ motif profile. 549 578 IPR000048 GO:0005515
Vvi14g0606 1225 Gene3D - 481 527 - -
Vvi14g0606 1225 Gene3D - 528 577 - -
Vvi14g0606 1225 Gene3D - 428 480 - -
Vvi14g0606 1225 ProSiteProfiles Dilute domain profile. 855 1168 IPR002710 -
Vvi14g0606 1225 PANTHER MYOSIN 1 1156 - -
Vvi14g0606 1225 MobiDBLite consensus disorder prediction 766 807 - -
Vvi14g0606 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 480 IPR027417 -
Vvi14g0606 1225 FunFam Class V myosin 134 270 - -
Vvi14g0606 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 578 IPR027417 -
Vvi14g0606 1225 PRINTS Myosin heavy chain signature 124 152 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi14g0606 1225 PRINTS Myosin heavy chain signature 177 205 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi14g0606 1225 ProSiteProfiles IQ motif profile. 453 482 IPR000048 GO:0005515
Vvi14g0606 1225 SMART iq_5 548 570 IPR000048 GO:0005515
Vvi14g0606 1225 SMART iq_5 500 522 IPR000048 GO:0005515
Vvi14g0606 1225 SMART iq_5 452 474 IPR000048 GO:0005515
Vvi14g0606 1225 SMART iq_5 429 451 IPR000048 GO:0005515
Vvi14g0606 1225 SMART iq_5 525 547 IPR000048 GO:0005515
Vvi14g0606 1225 SMART iq_5 477 499 IPR000048 GO:0005515
Vvi14g0606 1225 FunFam unconventional myosin-Va 481 528 - -
Vvi14g0606 1225 ProSiteProfiles IQ motif profile. 430 457 IPR000048 GO:0005515
Vvi14g0606 1225 Pfam IQ calmodulin-binding motif 480 498 IPR000048 GO:0005515
Vvi14g0606 1225 Pfam IQ calmodulin-binding motif 432 450 IPR000048 GO:0005515
Vvi14g0606 1225 Pfam IQ calmodulin-binding motif 454 469 IPR000048 GO:0005515
Vvi14g0606 1225 Pfam IQ calmodulin-binding motif 527 542 IPR000048 GO:0005515
Vvi14g0606 1225 ProSiteProfiles Myosin motor domain profile. 1 427 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi14g0606 1225 SMART MYSc_2a 1 428 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi14g0606 1225 SMART DIL_2 1043 1150 IPR002710 -
Vvi14g0606 1225 Gene3D Myosin VI head, motor domain, U50 subdomain 7 296 - -
Vvi14g0606 1225 Gene3D Kinesin motor domain 118 357 IPR036961 -
Vvi14g0606 1225 ProSiteProfiles IQ motif profile. 526 552 IPR000048 GO:0005515
Vvi14g0606 1225 Coils Coil 575 606 - -
Vvi14g0606 1225 MobiDBLite consensus disorder prediction 686 719 - -
Vvi14g0606 1225 Pfam Myosin head (motor domain) 1 415 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi14g0606 1225 Gene3D - 362 425 - -
Vvi14g0606 1225 Pfam DIL domain 1044 1147 IPR002710 -
Vvi14g0606 1225 Gene3D - 134 318 - -
Vvi14g0606 1225 CDD MyosinXI_CBD 806 1191 IPR037975 GO:0007015
Vvi14g0606 1225 ProSiteProfiles IQ motif profile. 478 505 IPR000048 GO:0005515
Vvi14g0606 1225 Coils Coil 670 746 - -
Vvi14g0606 1225 FunFam unconventional myosin-Va 432 480 - -
Vvi14g0606 1225 FunFam Myosin 2 7 121 - -
Vvi14g0606 1225 FunFam unconventional myosin-Va 529 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0606 Vvi-Chr14 7769597 7780880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0606 1 1225 Myosins gene family AT1G54560 83.673 0.0 2146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0606 K10357 - vvi:100243373 2373.97