Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0585 ATGGCCAATAACAACAACAACAGCAACAACCCACATGAGGGCTTGGCTGATGACTTCTTCGAGCAAATCTTGGCCGTCCCTTCTTACTCTGACCCTGCCTTTGGAGCCCACGATGGGAATTTGGCCTTGGCCTCAGGTGGTGGTGGAGGAGGTGGTGGTGGTGGTGGTGGTGGAGGTGGTGGTGCTGCTTCTGGGTATATGAGTATGGGTATGGGTATGCCTTTGGGGTTGAATTTGGAACATGGGTTTTTGAAAGCCAGGGATCAAAGTGGTGCTACCAATAATGCTGCTGCTGCTGCTTCTTCTTCATGTGGAATCACTGAGAGAGAATCGGTGCATCTGACAAACTTGTTTCCAGCTTTTGGACAGTTGCAGCCACAGTCACTCCGCCCTTCACCACCAGCCCCTGCTCCTCCTCCCCCACACCTTCCTCAGCCTTTTCATGGCCAACCAACTTCTAGTGCAGTTGCTGCTCAACCACATCCTCCTGCCATCCGCCCTAGGGTGCGAGCAAGACGAGGGCAAGCCACAGATCCCCACAGTATTGCTGAGAGGTTACGTAGAGAAAGGATAGCAGAGAGAATGAAGGCTTTGCAGGAATTGGTTCCTAGTGCCAACAAGACTGATAGAGCGGCTATGCTTGATGAAATTGTGGATTATGTGAAGTTTTTACGGCTTCAAGTCAAGGTTTTGAGCATGAGCAGACTTGGTGGAGCAGGTGCAGTAGCCCAGCTGGTAGCTGATGTTCCCTTGTTATCAATTGAGGGAGATGGCACTGAGGGTGGAAGCAATCAGCAAGCTTGGGAGAAGTGGTCAACAGATGGAACAGAACAACAAGTAGCTAAGCTGATGGAAGAAGATGTGGGAGCTGCCATGCAGTTCCTTCAGTCCAAGGCACTTTGCATCATGCCTATCTCACTGGCCTCGGCAATCTTCCGGACACACCAACCTGAACCATCAACACTAGTCAAGCCTGAATCCGATGCTCCCTCATAG 996 0.512 MANNNNNSNNPHEGLADDFFEQILAVPSYSDPAFGAHDGNLALASGGGGGGGGGGGGGGGGAASGYMSMGMGMPLGLNLEHGFLKARDQSGATNNAAAAASSSCGITERESVHLTNLFPAFGQLQPQSLRPSPPAPAPPPPHLPQPFHGQPTSSAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQPEPSTLVKPESDAPS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0585 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
Vvi14g0585 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 234 IPR036638 GO:0046983
Vvi14g0585 331 FunFam Transcription factor bHLH66 172 237 - -
Vvi14g0585 331 MobiDBLite consensus disorder prediction 129 147 - -
Vvi14g0585 331 Gene3D - 170 232 IPR036638 GO:0046983
Vvi14g0585 331 Pfam Helix-loop-helix DNA-binding domain 180 224 IPR011598 GO:0046983
Vvi14g0585 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 67 309 - -
Vvi14g0585 331 SMART finulus 181 230 IPR011598 GO:0046983
Vvi14g0585 331 MobiDBLite consensus disorder prediction 124 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0585 Vvi-Chr14 7430652 7435906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0585 147 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 74.332 1.16e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vvi14g0585 HLH 8.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0585 - - vvi:100262267 516.924