Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0582 ATGGCATCTTTTGTAAAACCTCAAGATTCTGCTGCTTTAGCTGACACTGGCTCACAGGCTTCCAAAACTTCTCAGTTGCGATCTCAAGCTCCTTGTAAAGGATCTGGATATGATTTATCCGGAGCACCAGATAAGGAGGCTGGTGGACCACTTGGAATTCCTTCTTTACCTGCCATGCAAAAGAAAGCTGGGGCTCAGTTGAGGCCTACAACAAGTGAATCATCTAGAGAACATTCAGATGACGATGAAGTTGAAGGAGAAACAGAAACAATTGAGAATATGGACCCTGCCGATGCAAAACGTGTCAGGAGAATGCTCTCAAATAGAGAATCAGCTAGACGCTCAAGAAGAAGAAAACAGGCTCATTTGACTGAGCTCGAGACACAGGTTGCCCAATTAAGACTTGAAAATTCTTCTTTGTTGAAGCGTCTTACTGATATAAGCCAAAAGTACAATGAAGCAGCTGTTGACAATAGGGTTTTAAAAGCTGATGTGGAAACATTGAGAGCAAAGGTGAAGATGGCTGAAGAGACGGTTAAAAGAGTTACTGGATTGAACCCATTGTTCCAAACCATGTCTGAGATATCTATGGCGGGCATGCATTCATTTGATGGAAGCCCATCTGACACATCAGCAGATGCTGCTGTTCCTGTGCAAGATGAACCAAAGCAGCACTTTTATCCATCTCCTTCTGATAACCTTATATCCACCCATGACCCAAGAATCAATAACGGTTTGGCAGACGTTTCTTCAGTTGAAAGCGTGCTGCAGAATCCTGCAGCTGCAGGAGCAGCAGGGAACAAGATGGGCCGAACTGCATCATTGCAGCGAGTGGCTAGCTTGGAGCATCTGCAAAAGCGGATCCGTGGGGCTGTCAATGGGCCTCAGGGCAGTGGAAACCAGCAATAA 909 0.4543 MASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSESSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAVNGPQGSGNQQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0582 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 153 IPR004827 GO:0003700|GO:0006355
Vvi14g0582 302 Pfam bZIP transcription factor 99 151 IPR004827 GO:0003700|GO:0006355
Vvi14g0582 302 Coils Coil 158 178 - -
Vvi14g0582 302 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
Vvi14g0582 302 Pfam Basic leucine-zipper C terminal 167 292 IPR020983 -
Vvi14g0582 302 SUPERFAMILY Leucine zipper domain 100 150 IPR046347 GO:0003700|GO:0006355
Vvi14g0582 302 FunFam BZIP transcription factor 98 149 - -
Vvi14g0582 302 PANTHER BASIC LEUCINE ZIPPER 63 2 291 - -
Vvi14g0582 302 MobiDBLite consensus disorder prediction 1 100 - -
Vvi14g0582 302 CDD bZIP_plant_GBF1 101 152 IPR045314 GO:0003700|GO:0006355
Vvi14g0582 302 Coils Coil 109 143 - -
Vvi14g0582 302 MobiDBLite consensus disorder prediction 12 31 - -
Vvi14g0582 302 Gene3D - 99 155 - -
Vvi14g0582 302 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 103 118 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0582 Vvi-Chr14 7404415 7408436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0582 5 189 bZIP Transcription Factor Family AT4G02640 52.688 6.01e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi14g0582 bZIP_C 3.4e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0582 K25784 - vvi:100255566 565.459