Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0572 ATGAGAACAATATTAATAATACCAACCTTCCGGGAAGTAACAGTGAAGCTTCTGAGCAAGGAGGCGATTCTTCAGGCTTCTATAAATGATTCCTATTCACAAAGGCTTCTTTACTCGTTCTTCTCCTCCTCTATTTTGATCCATTGTTTATTTTTCATGATGAAGTTCCATGGTGCAAAGCCCTATCAGCGGTGGCGGTTGGCTTTCATAGCTATCTACTTCACCAAGGTTCTTGATTCTTTGACTAAAAAGATTTTTGAGAAGAACATCCCATTGTTGGGCCCTGCGATACTGCGCTCTCCATCTTTTATTTCTGTTGATGTTCAAGATGTCCTTAAAAGTGACTCAAGTGATCACGTGCCCTTCTTCAATATTGACCAGAAGATGCTGACTGAAACGGTGAGAGACAAGGACTTTGAACGTTTGCATCAATTCGGAGGAATTAAACAGCTTGTAGCGGTTCTTAAGACTGATGAAAAGGACGGTATCGATGGCCATGAGGCTGATCTTAAGCACCGAAGAGATGTCTTTGGATCCAATCAGTACAGGAGGCCGCCCAAGAAGAGTTTCTTCAGTTTTGTTGTTGAAGCATTCAAGGACACCATCATTATTATACTTATGGTATGTGCAATCCTATCTCTTGGCTTTGGAATCAAACAGGAAGGCATTAAAGAAGGGTGGTATGATGGGGGCAGTATTGTTATTGCCATCTTTTTAGTTGTTATCGTCTCCTCTGTAAGCAATTTCAGGCAATCAAGACAGTTTCAAAAGCTTTCTAGTGAGACTAGTGACATAAAAGTGCAGGTGGTGAGACAAGGGAGGAGGCAACCCGTGTCCATCTTCCAACTTGTAGTGGGGGATATTGTGTGTTTGAATATCGGGGATCAGGTTCCTGCTGATGGGTTGTTCATGGAGGGTCACTCCCTGAAGGTGGATGAATCTAGCATGACTGGCGAAAGCGACCATGTTGAGATCAATGATAAAGATAATCCATTCTTGTTCTCTGGCACCAAGGTATCGGACGGATTTGGTACAATGCTTGTCACTTCGGTAGGGATGAACACGGCATGGGGTGAGATGATGAGCTCTATTCGTCGTGAATTGGACGAGCAGACTCCATTGCAAGCTCGTCTCGACAAGCTGGCCTCAACCATAGGGAAGCTTGGGTTGGCCGTGGCTCTGATTGTTCTTGTGGTTCTCATCATCCGGTACTTCACTGGAAACACTGAAGATGAAAATGGGATGCAGGAGTTCAATGGCAGCAAGACAAACATCAACGATGTGATGGATGCGGTGGTGCATATCATTTCTGCAGCAGTTACCATTGTGGTGGTGGCGATTCCAGAGGGTTTGCCTTTGGCTGTAACCCTAAGTCTGGCCTATTCAATGAAAAGAATGATGGCTGATCAAGCCATGGTCAGGAAACTCTCAGCATGTGAAACAATGGGCTCTGCCACAACCATTTGCACAGATAAAACTGGCACCCTCACCTTAAACAAGATGAAGGTCGTTGAGTTTTGGCTTGGGAATGAAGTAATAGAGGATGATACTTACTTGGAAATAGCTCCATCTGTCCTTCAGTTATTGAAACAGGGGGTTGGTCTGAACACGACTGGTAGCGTTTGCAAGCTCCCTTCCACATCAGTTCCAGAGATCTCAGGTAGCCCCACTGAGACAGCAATTCTCACATGGGCTGTGGTAGATTTGGGCATGGACATTGACGAGCAGAAGCAAAGTTGTGAGATTCTCCATGTTGAGGCCTTCAATTCAGAGAAGAAGCGAAGTGGGGTTTTGGTGAGGACAATCACTGACCAAACAATTCAAACACATTGGAAGGGAGCTGCTGAGATGATACTAGCCACGTGTTCACACTATTTTGACAAAGGTGGGAAAACAAAACTAATGGATGATGACAAAAGAATGCAGTTTGGAGGAATTATTAGAGACATGGCAGCTAAAAGCCTGCGTTGCATAGCATTTGCCTACAAACAGGTTCTACAAGAAAATGGACAGTCCCATGAGAAGCTTGAAGAAACTGGCATGACCTTGTTGGGGCTAGTAGGCTTGAAGGACCCCTGTCGACCAGGGGTCAGAAGAGCAGTAGAAGATTGTAGAGATGCTGGAGTGAAAATTAAAATGATCACTGGAGACAACATTTTTACTGCAAAAGCTATAGCCATGGAATGTGGGATTCTCAAACCTGATGAGGATATGAACAATGCAGTAGTGGAAGGTGTAACATTCAGAAATTTCTCTGATGAAGAGAGGATGGAGAAGATTGACATGATTCGGGTAATGGCCAGATCTTCCCCATTTGACAAGCTTTTGATGGTGCAGAGCTTGAAGCAGAAAGGCCACGTGGTGGCAGTCACAGGTGATGGCACGAATGATGCACCTGCACTCAAAGAAGCAGACATTGGGCTATCCATGGGAATTCAAGGCACAGAAGTTGCAAAAGAGAGCTCAGACATTGTCATCCTGGACGACAACTTCACTTCTGTAGTAACAGTTTTGAGATGGGGAAGATGTGTATATAACAACATTCAAAAGTTCATCCAGTTTCAACTTACAGTCAATGTTGCTGCTCTTGTCATCAACTTTGTTGCTGCAGTTTCTTCTGGTGATGTACCTCTGACTGCAGTCCAGCTCTTGTGGGTGAACTTGATAATGGATACCTTGGGAGCTTTAGCCTTGGCAACTGAGCGACCCACTAATGATCTCTTGAAGAAGTCACCTGTAGGCCGAACCAAGCCACTTATAAGCAATGTCATGTGGAGGAATCTCATTGCTCAGGCCCTTTATCAGGTAGCTGTCTTGCTGATCCTACAGTTTAAGGGAAAGGATATCTTCAATGTGGATGAGAAGGTTAAGAACACCTTGATTTTCAATACTTTTGTCCTCTGCCAAGTCTTCAATGAGTTCAATGCAAGGCACATGGAGAAGAAGAATGTGTTCAAGGGTATACTTAAGAACAGGTTGTTTCTAGGGATCATCGGGTTTACTATAGTTCTTCAAGTGGTGATGGTTGAGTTCCTGAAGAGGTTTGCCGATACTGTGAGGCTGAATTGGGGGCAATGGGGTGCTTGTATAGCCATTGCATCTTTGTCTTGGCCAATCGCCTGGCTTGTGAAATGCCTTCCAGTTTCTGGCAAACGGTTTCTCATCTTTCCCAAGCCTAGTGTCTCTAAATCATAA 3195 0.4441 MRTILIIPTFREVTVKLLSKEAILQASINDSYSQRLLYSFFSSSILIHCLFFMMKFHGAKPYQRWRLAFIAIYFTKVLDSLTKKIFEKNIPLLGPAILRSPSFISVDVQDVLKSDSSDHVPFFNIDQKMLTETVRDKDFERLHQFGGIKQLVAVLKTDEKDGIDGHEADLKHRRDVFGSNQYRRPPKKSFFSFVVEAFKDTIIIILMVCAILSLGFGIKQEGIKEGWYDGGSIVIAIFLVVIVSSVSNFRQSRQFQKLSSETSDIKVQVVRQGRRQPVSIFQLVVGDIVCLNIGDQVPADGLFMEGHSLKVDESSMTGESDHVEINDKDNPFLFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRRELDEQTPLQARLDKLASTIGKLGLAVALIVLVVLIIRYFTGNTEDENGMQEFNGSKTNINDVMDAVVHIISAAVTIVVVAIPEGLPLAVTLSLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNKMKVVEFWLGNEVIEDDTYLEIAPSVLQLLKQGVGLNTTGSVCKLPSTSVPEISGSPTETAILTWAVVDLGMDIDEQKQSCEILHVEAFNSEKKRSGVLVRTITDQTIQTHWKGAAEMILATCSHYFDKGGKTKLMDDDKRMQFGGIIRDMAAKSLRCIAFAYKQVLQENGQSHEKLEETGMTLLGLVGLKDPCRPGVRRAVEDCRDAGVKIKMITGDNIFTAKAIAMECGILKPDEDMNNAVVEGVTFRNFSDEERMEKIDMIRVMARSSPFDKLLMVQSLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSSGDVPLTAVQLLWVNLIMDTLGALALATERPTNDLLKKSPVGRTKPLISNVMWRNLIAQALYQVAVLLILQFKGKDIFNVDEKVKNTLIFNTFVLCQVFNEFNARHMEKKNVFKGILKNRLFLGIIGFTIVLQVVMVEFLKRFADTVRLNWGQWGACIAIASLSWPIAWLVKCLPVSGKRFLIFPKPSVSKS* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0572 1064 SFLD C1.7: P-type atpase like 471 844 - -
Vvi14g0572 1064 Gene3D - 486 836 IPR023214 -
Vvi14g0572 1064 SUPERFAMILY Calcium ATPase, transduction domain A 265 363 IPR008250 -
Vvi14g0572 1064 PRINTS H+-transporting ATPase (proton pump) signature 823 848 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g0572 1064 PRINTS H+-transporting ATPase (proton pump) signature 643 661 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g0572 1064 PRINTS H+-transporting ATPase (proton pump) signature 791 807 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g0572 1064 PRINTS P-type cation-transporting ATPase superfamily signature 707 717 - -
Vvi14g0572 1064 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Vvi14g0572 1064 PRINTS P-type cation-transporting ATPase superfamily signature 685 696 - -
Vvi14g0572 1064 PRINTS P-type cation-transporting ATPase superfamily signature 791 810 - -
Vvi14g0572 1064 PRINTS P-type cation-transporting ATPase superfamily signature 815 827 - -
Vvi14g0572 1064 PRINTS P-type cation-transporting ATPase superfamily signature 312 326 - -
Vvi14g0572 1064 Gene3D - 499 692 IPR023299 GO:0000166
Vvi14g0572 1064 Pfam haloacid dehalogenase-like hydrolase 486 805 - -
Vvi14g0572 1064 FunFam Calcium-transporting ATPase 241 365 - -
Vvi14g0572 1064 Pfam Cation transporting ATPase, C-terminus 876 1045 IPR006068 -
Vvi14g0572 1064 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 697 IPR023299 GO:0000166
Vvi14g0572 1064 FunFam Calcium-transporting ATPase 808 1050 - -
Vvi14g0572 1064 CDD P-type_ATPase_Ca_PMCA-like 170 924 - -
Vvi14g0572 1064 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Vvi14g0572 1064 SMART Cation_ATPase_N_a_2 141 218 IPR004014 -
Vvi14g0572 1064 FunFam Calcium-transporting ATPase 499 692 - -
Vvi14g0572 1064 Gene3D - 196 1044 - -
Vvi14g0572 1064 Pfam Cation transporter/ATPase, N-terminus 147 213 IPR004014 -
Vvi14g0572 1064 PANTHER CATION TRANSPORTING ATPASE 116 1048 - -
Vvi14g0572 1064 Pfam E1-E2 ATPase 263 467 - -
Vvi14g0572 1064 SFLD p-type atpase 471 844 IPR044492 -
Vvi14g0572 1064 FunFam Calcium-transporting ATPase 687 836 - -
Vvi14g0572 1064 NCBIfam HAD-IC family P-type ATPase 432 513 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g0572 1064 NCBIfam HAD-IC family P-type ATPase 763 871 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi14g0572 1064 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 1048 IPR023298 -
Vvi14g0572 1064 Gene3D - 168 365 - -
Vvi14g0572 1064 NCBIfam calcium-translocating P-type ATPase, PMCA-type 129 1048 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vvi14g0572 1064 SUPERFAMILY HAD-like 487 896 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0572 Vvi-Chr14 7149380 7152574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0572 60 1058 Primary Pumps ATPases AT3G63380 67.198 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0572 K01537 - vvi:100257170 2036.92