Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0560 ATGGAAGATATCTGGCTATACACATCTCTTACCGTCGTCTTTCTATTGTTTGCTTTCAAAGTCTTGCTTCACAGAAGAAGAAACCATGGAAATCTCCCACCAAGCCCGCCTGCTTTTCCTGTACTAGGTCATCTCCACCTGATGAAATTACCTTTCCATCGAGCTCTACAGACTCTTTCTGAAAAGTATGGTCCCATATTCGCCCTCCGCCTCGGGTCTCGCCCAGTTGTTGTCGTCTCCTCTCCCTCCGCCGTCGAAGAATGCTTCACCAAGAACGACATCGTCCTCGCTAACCGTCCTTACTTCTTGACCGGTAAGCACCTTTGCTACAACCACACCACTGTGGAAGCCTTACCATATGGCGAAGACTGGCGCAACCTCCGCCGCCTCTGCTCAATCGAAATCCTCTCCTCCAATCGCCTTAACATGTTTCTAGGCATCCGCAGTGATGAAGTCAAGCTTCTGTTGCGCCGACTGTCTCAGGATTCCAGGGATAAGTTTGCAAAGGTAGAGTTGAAACCATTGTTTTCAAATCTGACGTTTAATACTATGACGAGGACGATTGCAGGGAAGCGATACCATGGCGAAGAAGTGGGTACGGAGGAGGTTAAGCAGTTTCGGGAGATCATAGGGGAGATTTTTGAGTTGGCTGGGAATTCAAACCCGATGGACTACTTGCCCATATTGGAGTGGGTTGACTATGGGGGTTACAAGAAGAAGCTGATGAAGATCAGTAGACGGACAGAGGCGATGCTGCAATATTTAATTGATGAGCATAGAAATAGCAAGAAGAGGGGTTTAGAGGATAGCACCACCATCGACCATCTGCTTTCATTGCAAAAATCAGAACCAGAGTACTACACTGATGAAATCATCAAAGGACTTGTACTGATTCTAATCCTCGGTGGAAGTGAGAGTACAGCGGTGACAATAGAATGGGCGATGGCTCTCCTACTCAATCATCCAGATGCGTTAAACAAAGTTAGAGAAGAGATAAACATTCACGTTGGACAAGGAAGATTGATGGAAGAATCAGATCTCTCCAAATTGGGGTACCTTCAAAATGTCATCTCTGAGACCCTTAGATTGTGCCCTGCAGCTCCACTCTTGCTACCCCATATGACATCAAGTCATTGTCAAGTGGGAGGATTTGATATACCAAAAGGCACAATGTTGATTACTAATGCATGGGCTATTCACAGGGACCCTAAGGCGTGGGATAACCCGACAAGTTTTAAGCCAGAGAGATTTAATAGCGGAGAAAATAATAATTACAAATTGTTCCCATTTGGGCTTGGAAGGAGGGCATGTCCTGGGAGTGGTCTAGCCAATAGGGTGATCGGTTTGACTTTAGGGTTATTAATTCAATGTTATGAGTGGAAAAGGGTTAGTGAGAAAGAAGTTGATCTGGCGGAACGGCTAGGACTCACCATGCCTAAGGCTATACCATTGGAGGCCATGTGCAAAGCTCGTGATATCATCAAGATGGTTGTTTGA 1497 0.4589 MEDIWLYTSLTVVFLLFAFKVLLHRRRNHGNLPPSPPAFPVLGHLHLMKLPFHRALQTLSEKYGPIFALRLGSRPVVVVSSPSAVEECFTKNDIVLANRPYFLTGKHLCYNHTTVEALPYGEDWRNLRRLCSIEILSSNRLNMFLGIRSDEVKLLLRRLSQDSRDKFAKVELKPLFSNLTFNTMTRTIAGKRYHGEEVGTEEVKQFREIIGEIFELAGNSNPMDYLPILEWVDYGGYKKKLMKISRRTEAMLQYLIDEHRNSKKRGLEDSTTIDHLLSLQKSEPEYYTDEIIKGLVLILILGGSESTAVTIEWAMALLLNHPDALNKVREEINIHVGQGRLMEESDLSKLGYLQNVISETLRLCPAAPLLLPHMTSSHCQVGGFDIPKGTMLITNAWAIHRDPKAWDNPTSFKPERFNSGENNNYKLFPFGLGRRACPGSGLANRVIGLTLGLLIQCYEWKRVSEKEVDLAERLGLTMPKAIPLEAMCKARDIIKMVV* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0560 498 FunFam Cytochrome P450 family protein 23 494 - -
Vvi14g0560 498 Gene3D Cytochrome P450 18 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 Pfam Cytochrome P450 33 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 CDD CYP81 64 484 - -
Vvi14g0560 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vvi14g0560 498 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PANTHER CYTOCHROME P450 82C3-RELATED 11 491 - -
Vvi14g0560 498 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g0560 498 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0560 Vvi-Chr14 6899413 6901418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0560 10 491 Cytochrome P450 AT4G37370 54.115 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0560 K13260 - vvi:100241780 985.711