Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0535 ATGAATGGTGTAATAAATCCTGAAGCAGATGATTACTCTGAGTTTGTGGAAGTTGATCCCACTGGAAGATATGGCAGATACAATGAAATACTTGGAAAGGGAGCTTCAAAGACAGTTTACAGAGCATTCGATGAGTATGAAGGCATTGAAGTTGCTTGGAACCAGGTCAAGCTTTATGATTTCCTGCAAAGCCCTGAAGATCTTGAGAGGCTCTACTGTGAAATTCATCTCCTTAAAACAATGAAACACAATAACATTATGAAGTTCTATACTTCTTGGGTTGATACTGCTAATAGGAACATCAATTTTGTCACTGAGATGTTCACTTCTGGGACTCTCAGGCAGTATAGGCAAAAGCACAAGAGAGTTAACATTAGAGCAGTGAAGCATTGGTGCAGACAGATCTTGAGAGGGCTTCTCTACCTCCATAGCCATGACCCACCTGTGATTCACAGAGATCTCAAGTGTGACAATATTTTTGTAAATGGCAACCAAGGAGAAGTTAAGATTGGTGATCTAGGGCTTGCTGCAATTCTCCGAAAATCACATGCTGCTCACTGTGTTGGGACACCTGAGTTCATGGCACCAGAAGTGTATGAAGAGGAGTACAATGAATTAGTGGACATTTACTCTTTTGGTATGTGCATCTTGGAAATGGTCACTTTTGAATATCCATATAGTGAATGTACTCATCCTGCTCAGATCTACAAAAAGGTTATCTCGGGGAAAAAACCAGATGCTTTATATAAAGTGAAGGATCCGGAAGTGCGAGAATTTGTTGAGAAATGCTTGGCTTCTGTGTCTCTGAGGCTCTCCGCTAGAGAGCTTTTGCAGGATCCTTTTCTCCGAATAGATGATTGTGAATCCGACTTGAGACCAATAGAGTGCAGGAGAGAACCTGATGATATGGTTCCTCTCTTAAGACAACCTTTTCTTGAATACCATCATAGTAACAACTCTTTCAGTAATGGATACTCCAATGCTGTCGATTTTGACGCCCATAATGGATGGGGGTATCAACCACTTGAGATGGAACCAACTGGGATTGAGCTTTTTGAGTACCATGAAGACGAGCATCCTGCAAATGTGGACATAAGCATCAAAGGGAAGAGGCGGGAAGATGATGGCATCTTTCTAAGACTCAGGATTGCAGATAAAGAAGACCACATTCGTAACATCTATTTCCCATTCGACATTGAGATGGATACAGCATTGAGCGTTGCAACTGAAATGGTTGCTGAACTGGATATTACAGACCAAGACGTGACTAAAATAGCAGATATGATTGATGGGGAGATAGCATCCTTGGTCCCTGAATGGAAGCCAGGGCCAGGAATAGAAGAAACTCCCTGCTTTGCAACCTTAAACTTGTGTCACAATTGTGTTTCCAACCATACATCTAATGGTTCCCTCATGGATATTCTAGCTAACAATCCAGGCGCCAAGAACTTGCAAATATTCCAGTGTTCAAATGGATGTGCAGCAATGCATGGCCGGTTTGAGGAAATCACTTACCAAGTTGATGGGGCTGACCATCACATACCAGAGGGTCAATCAGAAGAATTGCATTGTACAGAAATTTGGGATAAGCATGAAAGTCGCGAACTTAGCTCGGTAAGCTCTGGAGAGAGCCCTTCTGATGAAGAATACGAAAAAATAAACCATTCAATCATTAAGGATGAAAGAGGATCAGGAACTGGAAATGTTGTTGCGTCCAATGTGAAAAATTCTATCAGTCATTTACGTAATCCTAGCTCTTCCTCGGCAATTCCTTCAATGTCTTGTGCCCTCTCAGATGATTATGAGAACGAAATTCAGCAGGTATTGAGGTGGCTGAAAGCTAAGCATCAAATGGAAATGAGAGGACTTAGAGATCTACAGTTAGGATTTGCATCAAAGCCTTCAAGTTTGGATAACAGACAACTCAAACCTGACAATGAGGGTCTTTTCTCAACACTCTCAAACACATCACAAGGACACAACAATGGGCTATTCCTGAAATCTTCTGCCTATGACAAGCATTTTACTTCTAATTGTGCTACTCAAGTCAACAAGTGCAGCCCCGATTTGGTAACCCACGGGGCCCGAAATTGTGAGGCGAACAAGGGGTCCCGAAGTGCAGAGGACATGGTCCATGTGGTTACTGCCAAGAGTTTCTACACTGCAGGCTCATTGCTTCCGTGCCCAATTCATAGGACAATGTCCCTACCAGTTGATGCTGTTGATATATAA 2232 0.4234 MNGVINPEADDYSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTMKHNNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVREFVEKCLASVSLRLSARELLQDPFLRIDDCESDLRPIECRREPDDMVPLLRQPFLEYHHSNNSFSNGYSNAVDFDAHNGWGYQPLEMEPTGIELFEYHEDEHPANVDISIKGKRREDDGIFLRLRIADKEDHIRNIYFPFDIEMDTALSVATEMVAELDITDQDVTKIADMIDGEIASLVPEWKPGPGIEETPCFATLNLCHNCVSNHTSNGSLMDILANNPGAKNLQIFQCSNGCAAMHGRFEEITYQVDGADHHIPEGQSEELHCTEIWDKHESRELSSVSSGESPSDEEYEKINHSIIKDERGSGTGNVVASNVKNSISHLRNPSSSSAIPSMSCALSDDYENEIQQVLRWLKAKHQMEMRGLRDLQLGFASKPSSLDNRQLKPDNEGLFSTLSNTSQGHNNGLFLKSSAYDKHFTSNCATQVNKCSPDLVTHGARNCEANKGSRSAEDMVHVVTAKSFYTAGSLLPCPIHRTMSLPVDAVDI* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0535 743 FunFam probable serine/threonine-protein kinase WNK9 108 287 - -
Vvi14g0535 743 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Vvi14g0535 743 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
Vvi14g0535 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Vvi14g0535 743 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0535 743 Gene3D - 376 441 - -
Vvi14g0535 743 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Vvi14g0535 743 CDD STKc_WNK 23 282 - -
Vvi14g0535 743 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 646 - -
Vvi14g0535 743 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Vvi14g0535 743 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0535 743 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0535 743 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 432 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0535 Vvi-Chr14 6462658 6465676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0535 9 534 MAP Kinase Kinase Kinase AT3G22420 56.042 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vvi14g0535 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0535 K08867 - vvi:100854301 1514.98