Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0515 ATGAAGCACATTTTCAAGAAGCTTCATATAGGGAGTAGCAGTCACGATCCCAATCGATCCAACGAAACCCTAAGCTCCGCCACTACATCATCGCCCGCCTGTGCTTCCGATCATCGGACATCTTCCGCGCAGTCTTCGGTGAGCCCTCCCTCCTCCTATCCTTCTCCGACTACTGTATCCTCCACCGCCGCCTCCACCCTCCCCACCGCCACCTCTCCGGCGGCATCGAATCGGTCGGACTATTTCTTGTCCGAAGAGGAGTTTCAGGTCCAACTTGCTCTTGCTATCAGCGCTTCCAATTCGGACTTCCGTGATGATTCGGAGAAGGATCAGATCCGCGCCGCGACGTTGCTCAGCTTGGGTCGCCACCGAACTGATTCGGTCCGCGATAAGGATGAATCGGCGGAGTCTATGTCGCGCCGATATTGGGATTACAATGTGCTTGACTATGAAGAGAAAGTGGTAGATGGGTTTTATGATGTGTATGGGCTCTCCACAGATCCAGTAATCCAAGGGAAAATGCCATCTCTCACAGATCTTGAAACAAACCTTGGAAACTCTGGATTTGAAGTGATTGTAGTTAACCGCAGAATTGACCCTGCCCTGGAAGAGTTGGTGCAAGTCGCACACTGTATTGCCTTAGACTGCCCTGCTGCTGAGGTTGGTGTTTTGGTGCAGAGGCTTGCTGAGATTGTTACAGATCACATGGGTGGGCCAGTAAGGGATGCTAATATTATGTTGGTGAAGTGGATGGAAAGCAGAAAAGATTTGAGGACATCTCTTCACACAAGCATTTTGCCTGTTGGGTCCTTAAGTATTGGCCTTTCACGTCACCGTGCTTTGCTTTTCAAGATATTAGCTGACAATGTTGGTGTACCATGTCGACTGGTAAAAGGTAGTCATTACACTGGCGTAGAGGATGATGCTGTCAACATAATAAAATTGGATAATGAAAGGGAGTTTTTGGTTGATCTCATGGGAGCCCCTGGGACACTTATTCCAGCTGACATTCTTAGTGCAAAGGATAGTTCTTTAAAGTCATATAATCCAAAATTAAGTAAAATCCCAACTCTTCAGGCATCTAAGGACCCTGGAGGTGTTTACTCAAGACCTAAGCCATTGCTTGGTGATTATGAAGGCAGTAGTCAAACCTCCACAATTGAAAATAGTTTGCCTCAGGATAGGAAAGCAAGTTCTGAAAAGATAGAATCCTTGGATTCATTTTCTAGTTCAAGTGGTGACACTGGTGTTGGTACTTCCAGAATTTCTAAAAGAGTGACTCCTGTTAATCAGTCAGATCTTCGGCCTTCATTGGCAATTGGGGCCTCTGTGTATAAAGGGAGTCGTGGTGCCAATGCAGTTGGTGATGGTTCGAGGATGAATGTTAACATAGTTCCATATAATCAAAACAGCACAGAAGACCCTAAAAACCTTTTTGCAGATCTTAATCCTTTCCAGATGATAGGATCCAGCAAGGCTTCTGCACAGAGCAAACCTATGGAGAATAAAGTTGATGAGTTTCAAAGAGAGAAAAATAGCGCTGCCCCTGGTAGACCCCCTTTGCCATTGATGTGGAAGAATCGTTATGCTAACAATGAGGTCCCAAGAAAAAAGGAAAATGATTTTGTGGAGGGTCTCTTTCCAAAAATCAACCGTGAAACCAATGACTACAATCTGCCATCATTAACTTCCAACAATGCTACTACATCTGAAAAAGTTTATTCCGGTGTTTTCAAGTTATCTGGTAATGCCTATATGAATAACAAAGTTAATGATGACCAAAATTCTTCTTGTAATACCACTTCAATGTTGGCACCAAGCACAAGTCAGTTCAATAGGTTATCTTTGGATGAGGATGTAAATGCTAATTACAATGAAAAATATCACAAGGATGGGAAAGTTTTTCAAAGTGACATGGTAGATGCTGCAAAAGAACATGACAAGAATGAAACTGGTCTGCATGATCACAGAAAGTTCAGACATGATAGCTTTATGGAGAACAATTTGAGGGAAGCTGAAAGTCCTTGCTCGTCTGTTGACAGTGATGCTGGTAAAGTTGATCAAATGTTTGAAGATGTAGGTGAATGCGAAATTCCTTGGGAAGACCTGGTTCTTGGGGAAAGGATTGGACTAGGCTCGTATGGAGAGGTCTACCATGGTGATTGGAATGGCACAGAGGTTGCTGTGAAGAAGTTCTTGGACCAGGATTTCTCAGGTGCTGCTTTGGCCGAGTTCAAAAGAGAAGTGCGAATAATGCGTAGATTACGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGCCCTCCAAACCTCTCTATCATCACTGAGTTTCTTCCAAGAGGAAGCTTATATCGGATTCTTCATCGTCCTTCTTGTCAAATTGATGAGAAGCGTAGAATTAAAATGGCTCTTGATGTGGCAAAGGGTATGAATTGTTTGCACACCAGTTTACCAACAATTGTTCACCGGGATTTGAAGTCACCAAATCTGCTGGTTGATAAGAACTGGAATGTCAAGGTATGTGATTTTGGGTTGTCACGCCTGAAGCACAACACATTTTTGTCATCCAAATCAACTGCTGGAACGCCTGAGTGGATGGCCCCAGAAGTTCTCCGCAATGAAAATTCAAATGAGAAGTGTGATGTCTATAGCTTTGGAATCATTCTGTGGGAGCTTGCAACTTTAAGGTTGCCTTGGAGTGGGATGAATCCAATGCAAGTTGTGGGAGCAGTAGGTTTCCAGAACCGTCGTCTTGACATACCAAAGGAAGTTGATCCCTTGGTTGCAAGGATAATCTGGGAATGCTGGCAGACGGATCCGAACTTGCGCCCATCGTTTGCACAGCTGACAGTAGCTCTGAAGCCCTTACAGCGACTGGTGATCCCTCAACATTTGGACCAGCAAAGCCTGACCCTCCAGCAAGAGATCTCAGATGAAGTTAGATTGTGCGATTAA 2961 0.4441 MKHIFKKLHIGSSSHDPNRSNETLSSATTSSPACASDHRTSSAQSSVSPPSSYPSPTTVSSTAASTLPTATSPAASNRSDYFLSEEEFQVQLALAISASNSDFRDDSEKDQIRAATLLSLGRHRTDSVRDKDESAESMSRRYWDYNVLDYEEKVVDGFYDVYGLSTDPVIQGKMPSLTDLETNLGNSGFEVIVVNRRIDPALEELVQVAHCIALDCPAAEVGVLVQRLAEIVTDHMGGPVRDANIMLVKWMESRKDLRTSLHTSILPVGSLSIGLSRHRALLFKILADNVGVPCRLVKGSHYTGVEDDAVNIIKLDNEREFLVDLMGAPGTLIPADILSAKDSSLKSYNPKLSKIPTLQASKDPGGVYSRPKPLLGDYEGSSQTSTIENSLPQDRKASSEKIESLDSFSSSSGDTGVGTSRISKRVTPVNQSDLRPSLAIGASVYKGSRGANAVGDGSRMNVNIVPYNQNSTEDPKNLFADLNPFQMIGSSKASAQSKPMENKVDEFQREKNSAAPGRPPLPLMWKNRYANNEVPRKKENDFVEGLFPKINRETNDYNLPSLTSNNATTSEKVYSGVFKLSGNAYMNNKVNDDQNSSCNTTSMLAPSTSQFNRLSLDEDVNANYNEKYHKDGKVFQSDMVDAAKEHDKNETGLHDHRKFRHDSFMENNLREAESPCSSVDSDAGKVDQMFEDVGECEIPWEDLVLGERIGLGSYGEVYHGDWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPSCQIDEKRRIKMALDVAKGMNCLHTSLPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNENSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQTDPNLRPSFAQLTVALKPLQRLVIPQHLDQQSLTLQQEISDEVRLCD* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0515 986 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 965 - -
Vvi14g0515 986 MobiDBLite consensus disorder prediction 403 431 - -
Vvi14g0515 986 MobiDBLite consensus disorder prediction 378 393 - -
Vvi14g0515 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Vvi14g0515 986 CDD STKc_MAP3K-like 709 952 - -
Vvi14g0515 986 MobiDBLite consensus disorder prediction 356 431 - -
Vvi14g0515 986 Pfam Protein tyrosine and serine/threonine kinase 704 953 IPR001245 GO:0004672|GO:0006468
Vvi14g0515 986 Gene3D Phosphorylase Kinase; domain 1 696 780 - -
Vvi14g0515 986 Gene3D Transferase(Phosphotransferase) domain 1 782 964 - -
Vvi14g0515 986 SUPERFAMILY Protein kinase-like (PK-like) 688 951 IPR011009 -
Vvi14g0515 986 Pfam Ethylene-responsive protein kinase Le-CTR1 135 333 - -
Vvi14g0515 986 ProSiteProfiles Protein kinase domain profile. 703 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0515 986 SMART serkin_6 703 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0515 986 MobiDBLite consensus disorder prediction 14 75 - -
Vvi14g0515 986 ProSitePatterns Protein kinases ATP-binding region signature. 709 731 IPR017441 GO:0005524
Vvi14g0515 986 PRINTS Tyrosine kinase catalytic domain signature 882 904 IPR001245 GO:0004672|GO:0006468
Vvi14g0515 986 PRINTS Tyrosine kinase catalytic domain signature 816 834 IPR001245 GO:0004672|GO:0006468
Vvi14g0515 986 PRINTS Tyrosine kinase catalytic domain signature 863 873 IPR001245 GO:0004672|GO:0006468
Vvi14g0515 986 PRINTS Tyrosine kinase catalytic domain signature 777 790 IPR001245 GO:0004672|GO:0006468
Vvi14g0515 986 PRINTS Tyrosine kinase catalytic domain signature 926 948 IPR001245 GO:0004672|GO:0006468
Vvi14g0515 986 MobiDBLite consensus disorder prediction 1 75 - -
Vvi14g0515 986 FunFam Serine/threonine-protein kinase isoform 1 694 781 - -
Vvi14g0515 986 FunFam PAS domain-containing protein tyrosine kinase family protein 781 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0515 Vvi-Chr14 6026727 6048652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0515 1 940 MAP Kinase Kinase Kinase AT1G08720 57.203 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vvi14g0515 PK_Tyr_Ser-Thr 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0515 - - vvi:100262285 1875.91