Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0514 ATGCAACAAAAAGTTGCTCCTCCTAGTGTTGATCCACTGCTTGAGCTTGGTGTTCTTCTTGTTAGGGTTACTTTTCGACCATTCAGGGTCAGCGATGTGGATGACTTCATACTGTGGGCGGGCGATGAGCAAGTCACTCGAACCATCCGATGGAAGACCATCACCTCTAAGGAGGAAGCCTTGACCTTCATCAAAGAAGTCTGCATCCCCCACCATTTTTGTCGATCCATATGTATAGATGACCGCTCCATCGGCTTTGTTTTGGTCATCAGGTGGTCGGGCGCCGACAGACATAAGGCGGACATAGGGTATGGTGTAGCTGCAAAGCATTGGGGGCAGGGGATTGCCACCAAAGCTGTGAAGATGGTTATATCGGAGGTGTTCAAGGACTTCCCTGATCTGGTAAGGTTGCAAGCATTTGCAGTGGTGGAGAATATTGCTTCTCAGAGGGTGTTGGAGAAAGCTGGATTCACCAGGGAGGGTTTACTCAGGAAATACACATTTCTCAAGGGCCAATTGAAAGACTTGGTGATATATAGTCTTTTGTCCACTGACTCGAACGGGGCCGTGGATGATATGGTGTGA 585 0.4872 MQQKVAPPSVDPLLELGVLLVRVTFRPFRVSDVDDFILWAGDEQVTRTIRWKTITSKEEALTFIKEVCIPHHFCRSICIDDRSIGFVLVIRWSGADRHKADIGYGVAAKHWGQGIATKAVKMVISEVFKDFPDLVRLQAFAVVENIASQRVLEKAGFTREGLLRKYTFLKGQLKDLVIYSLLSTDSNGAVDDMV* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0514 194 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 175 IPR000182 GO:0016747
Vvi14g0514 194 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 182 IPR016181 -
Vvi14g0514 194 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 22 186 - -
Vvi14g0514 194 Gene3D - 21 192 - -
Vvi14g0514 194 Pfam Acetyltransferase (GNAT) domain 22 158 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0514 Vvi-Chr14 6023742 6026153 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi14g0514 Acetyltransf_3 3.1e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0514 - - vvi:100267445 349.362