Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0513 ATGCTGTGGGCGGGCGATGAGCAAGTCACTCGAACCATCCGATGGAAGACCATCACCTCTAAGGAGGAAGCCTTGACCTTCATCAAAGAAGTCTGCATCCCCCACCCTTTTTATCGATCCATATGCATAGATGACCGCTCCATCGGCTTTGTTTATGTCATCAGGGGGTCGGGCGCCGACAGACAGAAGGCGAGCATGGGGTATGGTGTAGCTGCAAAGTATTGGGGGCAGGGGATTGCCACCAAAACTGTGAAGATGGTTATATCAGAGGTGTTCAAGGACTTCCCTGATCTGGTAAGGTTGCAAGCAGTTGCTGTGGTGGAGAACATTGCTTCTCAGAGGGTGTTGGAGAAAGCTGGATTCACCAGGGAGGCTTTACTCAGGAAACACTCATTTCTGAAGGGCCAATTGAAAGACTTGGTGATATATAGTCTTTTGTCCACTGATTCGAATGGGGCCGTGGATGATGAAGTATGA 477 0.4969 MLWAGDEQVTRTIRWKTITSKEEALTFIKEVCIPHPFYRSICIDDRSIGFVYVIRGSGADRQKASMGYGVAAKYWGQGIATKTVKMVISEVFKDFPDLVRLQAVAVVENIASQRVLEKAGFTREALLRKHSFLKGQLKDLVIYSLLSTDSNGAVDDEV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0513 158 Gene3D - 1 151 - -
Vvi14g0513 158 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 146 IPR016181 -
Vvi14g0513 158 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 150 - -
Vvi14g0513 158 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 139 IPR000182 GO:0016747
Vvi14g0513 158 Pfam Acetyltransferase (GNAT) domain 3 122 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0513 Vvi-Chr14 6022283 6022759 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi14g0513 Acetyltransf_3 1.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0513 - - vvi:100255573 303.908