Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0511 ATGGATTCCGGGACTGTCACTCTCAGACCATTCAGGGTCAGCGATGTGGATGACTTCATACTATGGGCAGGCGATGATCAAGTCACTCGAAACATCCGGTGGAAGACCATCACCTCTAAGGAGGAAGCCTTGACCTTCATTAAAGAAGTCTGCATCCCCCACCCCTGGCGTCGATCCATATGTATAGATGACCGCTCCATCGGCTTTGTTTCAGTCTACCGGTGGTCGGGCAACGAAATATGTAAGGCGGACATAGCGTATGGGATAGCTGCAAAGTATTGGGGACAAGGGATTACCACCAAAGCAGTGAAGATGGCTGTATTAGAGGTGTTTAAGGACTTCCCTGATCTGGTAAGGCTGCAGGCATTTGCTGCAGTAGAGAATAAGGCCTCTCAGAGGGTGTTGGAGAAAGCTGGGTTCACCAAGGAGGACTACATCTCCAAATGGGCAGAAGTTGTGCCACTTAAAGAGATGGATTCCGGGAGGGTCACTCTTAGACCATTCAGGGTCAGCGACGTGGATGACTTCATACTATGGGCAGGCGATGATCAAGTCACTCGAAACATCCGGTGGAAGACCGTCACCTCTAAGGAGGAAGCCTTGACCTTCATCAAAGATGTCTGCATCCCCCACCCATGGCGTCGGTCCATATGTATTGACGACCGCTCCATCGGCTTTGTTTCGGTCTACCGGTGGTCGGGCAACGACATATGTAAGGCGGACATAGCGTATGCGATAGCTGCGAAGTATTGGGGGCAAGGGATTACCACCAAAGCAGTGAAGATGGCTGTATCAGAGGTGTTTAAGGACTTCCCTGATCTGGTAAGGTTGCAGGCATTTGCTGCAGTGGAGAATAAGGCCTCTCAGAGGGTGTTGGAGAAAGCTGGGTTCACCAAGGAGGGTTTACTCAGGAAATACACATATCTCAAGGGCCAATTGAAGGATTTGGTGATATATAGTTTCTTGTCCACTGACATAAGCGTGGCCGTGGATGACGAACTACTGTAA 1008 0.501 MDSGTVTLRPFRVSDVDDFILWAGDDQVTRNIRWKTITSKEEALTFIKEVCIPHPWRRSICIDDRSIGFVSVYRWSGNEICKADIAYGIAAKYWGQGITTKAVKMAVLEVFKDFPDLVRLQAFAAVENKASQRVLEKAGFTKEDYISKWAEVVPLKEMDSGRVTLRPFRVSDVDDFILWAGDDQVTRNIRWKTVTSKEEALTFIKDVCIPHPWRRSICIDDRSIGFVSVYRWSGNDICKADIAYAIAAKYWGQGITTKAVKMAVSEVFKDFPDLVRLQAFAAVENKASQRVLEKAGFTKEGLLRKYTYLKGQLKDLVIYSFLSTDISVAVDDELL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0511 335 Pfam Acetyltransferase (GNAT) domain 162 298 IPR000182 GO:0016747
Vvi14g0511 335 Pfam Acetyltransferase (GNAT) domain 6 141 IPR000182 GO:0016747
Vvi14g0511 335 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 148 IPR016181 -
Vvi14g0511 335 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016747
Vvi14g0511 335 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 157 322 IPR016181 -
Vvi14g0511 335 Gene3D - 154 329 - -
Vvi14g0511 335 Gene3D - 1 153 - -
Vvi14g0511 335 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 163 315 IPR000182 GO:0016747
Vvi14g0511 335 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 160 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0511 Vvi-Chr14 6003115 6008302 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi14g0511 Acetyltransf_3 3.7e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0511 - - vvi:109123842 347.051