Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0506 ATGGATGGTACAAATGATCAGCTGGGAATTGCTCCTCGAGCCCTTGTTCAGCTCTTCCATAATGCCTCTTTGGATAAATCATCGTCTTATACCTTTTCAATGAGCATGTTGGAGGTTTACATGGGTAGTCTGAGAGATTTGCTGGCTCCCAAATCATTTTCCAGAGCATATGAAACCATATCAAGATGCAATCTCAACATTCAAACAGATCCAAAGGGATTGGTCGAAATTGAGGGTCTCTCAGAAGTGCCAATTTCTGATTTTACAAAAGCAAGTTGGTGGTATACCAAGGGGAGACGGGTTAGATCTACTTCATGGACTAACGTGAATGAAGCATCTAGCAGGTCTCATTGCTTAACGAGGATCACCATTTTTCGGCGTGGGGTTGCTTCGGAAGCTAAAGCAGAAGTAAGCAAACTGTGGATGGTTGACCTTGGAGGAAGTGAAAGATTGTTAAAGACAGGTGCCACTGGTCAGACACTAGATGAAGGAAGGGCTATAAATCTCTCTCTTTCAGCTCTTGGTGATGTCATTGCAGCCCTGAGAAGGAAGCGAGGCCATGTCCCCTATAGAAATAGCAAGCTAACTCAAATTCTCAAGGATTCCCTTGGGGACGGTTCAAAGATCTTGATGCTTGTGCATGTAAGCCCATTTGAAGAAGATATCGGGGAGACAACCTATTCCTTGAGCTTTGCAAAGAGAGCAAGAGCAGTGGAGTCCACTAAAGAGCTCCCTGAGGACTTAAAGAAGCAAAAGGAAAAGAGAATTGCCAAGCTTGAAGAAGAGATGAGAGAAGCTGAAGAAGAATGTCAGAAAGTTAGGAATCAAATACAAAAGGCTGAGTTCTTGTTAAATGAAAACAAAAGGCTCTTCTCTTCCACATATCAACCTCCTGAAGATGAAGGAAAGGCCCCTGCAAGCCCTAAGGGAGCTCTTGTACAAGTTTCTAGAGCATCTCTAACATTTGAGAAAACGACTAGAAGAAAATTTTCTAATTCTATGCCTCGATTCATGAATTCCACCGTGGCAAGTCGCCAAAGGCTAGGTGCTGCAGAAAAAGAAATTGATAGCAGAGCAAACAGTTCAAGAACTGGGACTCGAAGCTCAATCCAATTCTCAGGTTCCCAGTCCCTCAGTTATTCAGATCTTCGTTTCAAATCCATTTTAAGATCAAATAAAAAATCAAGATATGGGGAAACGAATACTCCTGCCATGGAGAGTCCCAAATGCAGTGATTTGGATTCTAAGACAACCTCCATGCCTCGGAGCAAGATCGTCACTTCTTCCAATCCAAACTTGAGAGTTACACTTTCCCGTCACAGAAGAAGGATGTCTGATTTTATCTAG 1347 0.4284 MDGTNDQLGIAPRALVQLFHNASLDKSSSYTFSMSMLEVYMGSLRDLLAPKSFSRAYETISRCNLNIQTDPKGLVEIEGLSEVPISDFTKASWWYTKGRRVRSTSWTNVNEASSRSHCLTRITIFRRGVASEAKAEVSKLWMVDLGGSERLLKTGATGQTLDEGRAINLSLSALGDVIAALRRKRGHVPYRNSKLTQILKDSLGDGSKILMLVHVSPFEEDIGETTYSLSFAKRARAVESTKELPEDLKKQKEKRIAKLEEEMREAEEECQKVRNQIQKAEFLLNENKRLFSSTYQPPEDEGKAPASPKGALVQVSRASLTFEKTTRRKFSNSMPRFMNSTVASRQRLGAAEKEIDSRANSSRTGTRSSIQFSGSQSLSYSDLRFKSILRSNKKSRYGETNTPAMESPKCSDLDSKTTSMPRSKIVTSSNPNLRVTLSRHRRRMSDFI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0506 448 ProSiteProfiles Kinesin motor domain profile. 1 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi14g0506 448 Pfam Kinesin motor domain 1 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi14g0506 448 Coils Coil 249 283 - -
Vvi14g0506 448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 278 IPR027417 -
Vvi14g0506 448 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 410 IPR027640 GO:0003777|GO:0007018
Vvi14g0506 448 MobiDBLite consensus disorder prediction 344 373 - -
Vvi14g0506 448 MobiDBLite consensus disorder prediction 394 432 - -
Vvi14g0506 448 Gene3D Kinesin motor domain 1 283 IPR036961 -
Vvi14g0506 448 PRINTS Kinesin heavy chain signature 188 209 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi14g0506 448 PRINTS Kinesin heavy chain signature 139 157 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi14g0506 448 PRINTS Kinesin heavy chain signature 107 124 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi14g0506 448 SMART kinesin_4 1 246 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0506 Vvi-Chr14 5967434 5969540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0506 9 238 Calmodulin-binding Proteins AT5G65930 42.424 8.02e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0506 - - vvi:100243532 854.358