Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0491 ATGACAGAGATCATTATTGCCGTTGCTGCAAAAGTTTCAGAGTACTTGGTTGCTCCAATTGGACGCCAGCTTAGTTATCTGTTTTGCTATCGGAGCTATACTGATGAACTCCACAACAAAGTTCAGAAGCTGGGGAAGGCGAGGGATGACGTGCTAGTAACTGTTGATGAAGCTACGAGACGAGGGGACCAAATCAGACCTATTGTTCAGGAGTGGCTCAATCGGGTAGATGAGATTACAGGGGAGGCAGAGGAATTGAAGAAGGATGAAAATAAGAGCTGTTTCAATGGGTGGTGTCCTAATCTCAAGTCACGGTACCTGCTAAGCAGGGAAGCGGACAAGAAGGCGCAGGTTATTGTTGAAGTCCAAGAAAACCGCAATTTCCCCGATGGCGTATCATATCGTGTCCCTCCACGGTGTGTAACGTTTAAAGAATATGAATCTTTTGAGTCAAGAGCCTCGACTTTGAACAAAATTATGGATGCATTAAGAGATGATAAGATGAAGATGATTGGGGTATGGGGGATGGGCGGCGTGGGCAAAACCACACTGGTGAAACAATTAGCTGAACAAGCTAAGCAAGAGAAGCTGTTCACCACAGAAGTCTATATACAGGTATCTTGGACTCGAGAACCAGAAAAAATTCAACAAGGAATTTCGGATATTCAACAAAAAATTGCAGACATGTTAGGCTTGGAATTTAAGGGGAAGGATGAATCCACAAGAGCAGCTGAACTAAAGCAGAGACTGCAGAAAGAGAAGATCCTTATCATCTTAGATGACATTTGGAAGGAAGTTAGTTTGGAGGAAGTTGGAATTCCTTCTAAAGATGACCAGAAAGGATGCAAAATAGTGATGGCATCTAGAAATGAAGACCTATTACACAAAGACATGGGCGCAAAAGAATGTTTTCCACTTCAACATTTACCAGAAGAAGAAGCTTGGCATTTATTTAAGAAGACAGCAGGTGATTCCGTGGAGGGGGACCAACTGCGACCCATAGCAATTGAGGTAGTTAACGAATGTGGGGGTCTACCAATTGCAATTGTAACAATTGCAAAGGCATTAAAAGATGAAAGCGTAGCTGTATGGAAGAATGCCTTGGACGAACTGAGGAGTTCTGCGCCAACAAACATCAGAGGAGTGGAGGAAAAGGTATACACATGTCTGGAGTGGAGTTACAACCATTTGAAGGGTGATGAAGTCAAGTCATTGTTCTTACTTTGTGGTTGGTTGAGCTATGCCGATATTTCAATGCATCAATTGTTACAGTATGCTATGGGTTTGGATTTGTTTGACCACCTCAAGTCATTGGAGCAAGCAAGAAATAAACTAGTTGCATTGGTGAGAACCCTCAAAGCCTCAAGCTTGTTACTGGACGGTGAAGATCATAGATACCATTTTGGAGGTGAAGCCTCAAGGTTGCTTTTCATGGATGCTGATAACAAGTCTGTCAGGATGCATGATGTTGTTCGTGATGTTGCCAGAAATATTGCATCCAAGGATCCTCATCCATTTGTAGTTAGACAAGATGTTCCATTGGAAGAATGGCCAGAGACTGATGAATCCAAATACATCTCTTTAAGTTGCAATGATGTGCATGAGCTTCCTCACCGGTTGGTATGTCCGAAACTTCAATTTTTTCTGTTGCAGAACAACAGTCCTTCCTTGAAAATCCCAAACACATTTTTTGAAGGGATGAACCTACTCAAAGTTTTAGCCTTGTCTAAAATGCATTTCACAACACTACCTTCAACGCTTCATTCCCTTCCAAATCTTCGAACATTACGTCTAGACAGGTGCAAGTTGGGAGACATAGCTCTAATTGGAGAGCTAAAGAAACTACAAGTTCTTAGCATGGTGGGTTCCCATATCCAACAACTTCCTAGTGAAATGGGGCAGTTGACGAATCTAAGGTTGTTGGATTTGAATGATTGTAAGCAGCTTGAAGTAATTCCACGAAATATCTTATCAAGCCTGTCTCGATTAGAATGTTTGTGCATGAAATTCAGCTTTACTCAATGGGCAGCTGAAGGAGTTAGTGATGGAGAAAGCAATGTTTGTTTATCGGAGCTGAATCATTTGCGCCATTTGACAACTATAGAGATAGAAGTACCAGCTGTCGAGTTGCTACCAAAAGAAGACATGTTCTTTGAGAACTTAACAAGATATGCAATATCTGTAGGCAGTATTGATAAGTGGAAAAACTCCTATAAAACATCAAAAACATTAGAGCTGGAACGGGTTGATAGAAGCTTACTTTCGAGGGATGGAATTGGAAAGTTGTTGAAGAAAACTGAAGAACTACAGTTGAGTAATTTGGAAGAAGCATGTCGTGGCCCAATTCCCCTAAGGTCTTTGGATAACTTAAAAACTTTATATGTGGAGAAATGTCATGGATTGAAATTTCTCTTCTTACTTTCCACAGCTAGAGGCCTTTCCCAACTAGAAGAAATGACAATAAATGATTGCAATGCCATGCAACAAATAATCGCATGTGAAGGGGAGTTCGAAATAAAAGAAGTTGATCATGTTGGGACCGACTTGCAACTGCTCCCTAAATTACGATTTTTGGCACTTAGGAATCTACCAGAGCTCATGAATTTTGACTACTTCGGCTCTAATTTGGAAACGACATCGCAAGGAATGTGTTCCCAAGGCAATCTTGATATCCAATTGCCATTTTTCAGTTATCAGGTATGTTTAAGTTTAATTAATAGTTAA 2724 0.4097 MTEIIIAVAAKVSEYLVAPIGRQLSYLFCYRSYTDELHNKVQKLGKARDDVLVTVDEATRRGDQIRPIVQEWLNRVDEITGEAEELKKDENKSCFNGWCPNLKSRYLLSREADKKAQVIVEVQENRNFPDGVSYRVPPRCVTFKEYESFESRASTLNKIMDALRDDKMKMIGVWGMGGVGKTTLVKQLAEQAKQEKLFTTEVYIQVSWTREPEKIQQGISDIQQKIADMLGLEFKGKDESTRAAELKQRLQKEKILIILDDIWKEVSLEEVGIPSKDDQKGCKIVMASRNEDLLHKDMGAKECFPLQHLPEEEAWHLFKKTAGDSVEGDQLRPIAIEVVNECGGLPIAIVTIAKALKDESVAVWKNALDELRSSAPTNIRGVEEKVYTCLEWSYNHLKGDEVKSLFLLCGWLSYADISMHQLLQYAMGLDLFDHLKSLEQARNKLVALVRTLKASSLLLDGEDHRYHFGGEASRLLFMDADNKSVRMHDVVRDVARNIASKDPHPFVVRQDVPLEEWPETDESKYISLSCNDVHELPHRLVCPKLQFFLLQNNSPSLKIPNTFFEGMNLLKVLALSKMHFTTLPSTLHSLPNLRTLRLDRCKLGDIALIGELKKLQVLSMVGSHIQQLPSEMGQLTNLRLLDLNDCKQLEVIPRNILSSLSRLECLCMKFSFTQWAAEGVSDGESNVCLSELNHLRHLTTIEIEVPAVELLPKEDMFFENLTRYAISVGSIDKWKNSYKTSKTLELERVDRSLLSRDGIGKLLKKTEELQLSNLEEACRGPIPLRSLDNLKTLYVEKCHGLKFLFLLSTARGLSQLEEMTINDCNAMQQIIACEGEFEIKEVDHVGTDLQLLPKLRFLALRNLPELMNFDYFGSNLETTSQGMCSQGNLDIQLPFFSYQVCLSLINS* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0491 907 Coils Coil 435 455 - -
Vvi14g0491 907 Coils Coil 69 89 - -
Vvi14g0491 907 Gene3D - 139 303 IPR027417 -
Vvi14g0491 907 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Vvi14g0491 907 FunFam Probable disease resistance protein At1g61300 139 302 - -
Vvi14g0491 907 SMART AAA_5 167 312 IPR003593 GO:0016887
Vvi14g0491 907 Gene3D Ribonuclease Inhibitor 517 877 IPR032675 -
Vvi14g0491 907 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 869 - -
Vvi14g0491 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 409 IPR027417 -
Vvi14g0491 907 PRINTS Disease resistance protein signature 342 356 - -
Vvi14g0491 907 PRINTS Disease resistance protein signature 170 185 - -
Vvi14g0491 907 PRINTS Disease resistance protein signature 249 263 - -
Vvi14g0491 907 PRINTS Disease resistance protein signature 633 649 - -
Vvi14g0491 907 SUPERFAMILY L domain-like 486 869 - -
Vvi14g0491 907 Pfam NB-ARC domain 154 395 IPR002182 GO:0043531
Vvi14g0491 907 Gene3D - 309 397 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0491 Vvi-Chr14 5677377 5680100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0491 168 653 WRKY Transcription Factor Family AT5G45050 20.658 5.93e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0491 - - vvi:100246921 1795.4