Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0490 ATGTATATAGTATGTGGAAATACCACATGTACATTTTTTTTTAATTTGGATTTTTTTTCTCCTTTACTATTTTTTTCTTTGGAAAAAAAAAAATTTATGTGGTATTTTGTTGTTAACATCTATTTTACAAAACTTTCAAAAAGAAATGTTTTAAACATGTTTATGCCTATCATCACAACTTTCCAATTGATGCCTTATATTGTGTTTTTGCTACAGGCTTCATTCCTTGAATCAAGAGCCTCCACTTTGAACAAAATTATGGATGCCTTAAGAGACGACAATATCAACTTGATTGGAGTATGGGGCATGGCCGGTGTGGGCAAAACAACACTGTTGAAACAAGTGGCTCAACAAGCTAAGCAACAGCGGTTGTTCACCACACAAGCCTATATGGATGTATCCTGGACTCGAGACTCGGATAAACGTCAAGAAGGAATTGCGGAACTTCAACTAGAAATTGAGAACGCGTTCGACTTGTCACTTTGCGAGGAGGATGAATCCAAAAAAGCGAATGAACTGAAGGAGGAACTGATGGTAGAAGGGAAGATCCTTATTATCTTGGATGATATTTGGAGGGAAGTTGATTTGGAGAAAGTAGGAATTCCGTGTAAAGGTGATGAAACACAATGCAAAATAGTGTTGGCTTCGAGAGATGGAGACCTATTATGCAAAAACATGGGCGCACAAATATGTTTTCCAGTGGAACATTTACCACCAGAAGAAGCTTGGAGTCTTTTTAAGAAGACAGCAGGTGATTCCGTGGAGGAGAATCTTGAACTGCGACCCATAGCCATTCAAGTAGTTGAAGAATGTGAGGGTCTACCAATTGCAATTTCATTGTTCTTACTTTGTGGGATGCTGGGCTATGGTAATATTTCATTGGATCTCTTGTTACCATATGCTATGGGTCTGGATTTGTTTGACCGCATCGACTCATTGGAGCAAGCAAGAAATAGACTACTTGCATTGGTGGAAATCCTTAAAGCCTCAAGCTTGTTACTCGACAGTCATGAAGATAGAGACAAGTTTGTGAGGATGCACGATGTTGTTTGCAATGTTGTCAGAGAAATTGCATCCAAGGATCCTCATCCATTTGTAGTCAGAGAAGATGTTGGATTGGAAGAATGGTCAGAGACTGATGAATCCAAAAGCTACACTTTCATCTCTTTGCATTGCAAAGCTGTGCATGAGCTTCCTCAAGGGTTGGTATGTCCGGACCTTCAATTTTTCCAATTGCATAACAACAATCCTTCCTTGAATATCCCGAACACATTTTTCGAAGGAATGAAAAAACTCAAAGTATTAGATTTGTCCAAAATGCGTTTTACAGTGCTACCTTCATCACTTGATTCCCTTACAAATCTCCAAACATTGCGTCTAGATGGGTGCAAGTTGGAAGACATTGCTCTAATTGGAAAGCTAACGAAACTAGAAGTTCTTAGCTTGATGGGTTCTACAATCCAACAATTGCCTAATGAAATGGTGCAATTGACCAATCTAAGGCTGTTGGATTTGAATGATTGCAAGGAGCTTGAAGTAATTCCACAAAATATCTTATCAAGTTTGTCTCGATTAGAATGTTTGTACATGAAATCTAGCTTTACTCAATGGGCGGTTGAAGGTGAAAGCAATGCTTGCTTATCCGAGCTAAATCATTTGTCTCATTTGACAACTTTAGAGATAGATATACCAAATGCCAAGTTGCTACCAAAAGACATTCTATTTGAGAACTTGACAAGATATGGGATATTTATAGGTGTTTCGGGCGGGTTGAGAACCAAAAGAGCATTGAATCTCTATGAAGTCAATAGAAGCTTACATTTGGGGGATGGAATGAGCAAGTTGTTGGAGAGAAGTGAAGAACTACAGTTCTACAAATTAAGTGGTACTAAATATGTGCTTTACCCATCAGATAGGGAGAGTTTTCGTGAACTGAAGCATCTTCAAGTTTTTAACAGTCCCGAGATTCAATATATCATTGATTCAAAGGATCAATGGTTTCTGCAACATGGTGCCTTTCCTCTATTGGAGTCATTGATTCTTATGAAGTTGGAAAACTTGGAAGAAGTATGGCATGGCCCAATTCCAATAGAATCTTTTGGGAATCAGAAATACAAGAAGATGGACATGGTGGGACCAATTTGCAACTATTCCCAAAATTGCGATCCTTGA 2172 0.3844 MYIVCGNTTCTFFFNLDFFSPLLFFSLEKKKFMWYFVVNIYFTKLSKRNVLNMFMPIITTFQLMPYIVFLLQASFLESRASTLNKIMDALRDDNINLIGVWGMAGVGKTTLLKQVAQQAKQQRLFTTQAYMDVSWTRDSDKRQEGIAELQLEIENAFDLSLCEEDESKKANELKEELMVEGKILIILDDIWREVDLEKVGIPCKGDETQCKIVLASRDGDLLCKNMGAQICFPVEHLPPEEAWSLFKKTAGDSVEENLELRPIAIQVVEECEGLPIAISLFLLCGMLGYGNISLDLLLPYAMGLDLFDRIDSLEQARNRLLALVEILKASSLLLDSHEDRDKFVRMHDVVCNVVREIASKDPHPFVVREDVGLEEWSETDESKSYTFISLHCKAVHELPQGLVCPDLQFFQLHNNNPSLNIPNTFFEGMKKLKVLDLSKMRFTVLPSSLDSLTNLQTLRLDGCKLEDIALIGKLTKLEVLSLMGSTIQQLPNEMVQLTNLRLLDLNDCKELEVIPQNILSSLSRLECLYMKSSFTQWAVEGESNACLSELNHLSHLTTLEIDIPNAKLLPKDILFENLTRYGIFIGVSGGLRTKRALNLYEVNRSLHLGDGMSKLLERSEELQFYKLSGTKYVLYPSDRESFRELKHLQVFNSPEIQYIIDSKDQWFLQHGAFPLLESLILMKLENLEEVWHGPIPIESFGNQKYKKMDMVGPICNYSQNCDP* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0490 723 PRINTS Disease resistance protein signature 495 511 - -
Vvi14g0490 723 PRINTS Disease resistance protein signature 97 112 - -
Vvi14g0490 723 PRINTS Disease resistance protein signature 271 285 - -
Vvi14g0490 723 PRINTS Disease resistance protein signature 177 191 - -
Vvi14g0490 723 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 62 703 - -
Vvi14g0490 723 SUPERFAMILY L domain-like 345 682 - -
Vvi14g0490 723 Coils Coil 310 330 - -
Vvi14g0490 723 Pfam Leucine rich repeat 408 465 IPR001611 GO:0005515
Vvi14g0490 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 281 IPR027417 -
Vvi14g0490 723 Gene3D Ribonuclease Inhibitor 378 719 IPR032675 -
Vvi14g0490 723 Gene3D - 237 283 IPR042197 -
Vvi14g0490 723 Pfam NB-ARC domain 81 281 IPR002182 GO:0043531
Vvi14g0490 723 Gene3D - 69 228 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0490 Vvi-Chr14 5671014 5674017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0490 94 516 WRKY Transcription Factor Family AT5G45050 22.973 3.22e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0490 - - vvi:104881433 1001.12