Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0488 ATGACAGAGATCGTTAGTGCCGTTGTTGAAAAAGTTTCAGAGTACTTGGTTGCTCCAATTGGACGCCAGCTTAGTTATCTGTTTTGCTACCGCAGCCACATGGATGAACTCGACAAGAAGATTCAGGAATTGGGGCGTGTGAGGGGTGACCTTCAGATAACTGTTGATGCAGCTATTAGAAGTGGGGATGAAATCAGACCTATTGTTCAAGACTGGCAGACTCGGGCAGACAAGAAGACACGGGAGGCAAAGACATTCATGGAAGATGAAAAGAACAGAACCAAGAGCTGTTTCAATGGGTGGTGTCCTAACCTCATGTCACGTTACCAGCTAGGCAGAGAAGCACACAAGAAGGCGCAGGTTATTGCTGAAATCAGAGAACACCGCAATTTCCCCGATGGCGTATCATATAGTGCCCCCGCCCCGAACGTGACTTATAAAAATGATGACCCTTTTGAATCAAGAACATCAATTTTGAATGAAATAATGGATGCATTGAGAGATGATAAGAACAGCATGATTGGGGTATGGGGAATGGGCGGTGTGGGCAAAACCACGCTGGTAGAACAAGTAGCTGCACGAGCTAAGCAACAGAAGTTATTTGACAGAGTAGTGATGGCATATGTATCCCAAACTGTGGACTTGAAGAAAATCCAAGCACAGATTGCAGATGCGTTAGGTTTGAAATTTGAGGAGGAGAGCGAAACCGGAAGAGCAGGGCGGCTTAGTCAGAGGTTGACACAAGAGAAGAAGCTTCTCATAATTTTAGATGATCTTTGGGCGGGCCTTGCTTTGAAGGCCATCGGGATCCCTTCGGATCATAGAGGGCTGAAAATGGTGCTGACTTCTAGAGAGCGTGACGTTTTGTCTAGGGAGATGGGCACCCAAGAGAATTTTGCTGTTGGACATTTGCCGCCAGGAGAAGCATGGAGTTTATTTAAAAAAATGACAAGTGATTCAATTGAGAAACGTGATTTGAAACCTACAGCAGAGAAGGTGCTTGAAAAATGCGCGGGTTTGCCTATTGCAATTGTTATAGTTGCAAAGGCATTAAATGGGAAGGATCCGATTGCATGGAAGGATGCCCTACGACAACTGACACGATCTATTGAGACCACTGTTAAAGGAATTGAAGCAAAAATCTTCCTCACTCTAGAGTTGAGCTACAATTCCTTGTACAGTAATGAGGTGAAGTCATTCTTCCTGCTTTGCGGTTTGTTGCCTTATGGTGATACTCCAATTGATAACTTGTTTAAATATGGTGTGGGTCTCGATTGGTTCCAAAACATCAATTCATTGGAAGAAGCCTGGGATAGACTGCATACGTTGATTGACAACCTCAAAGCTTCAAGTTTATTGCTAGAAAGTGATGATGATGAATGTGTCAGAATGCATGACATTGTTCGTGATGTCGCCAGAGGAATTGCATCCAAGGATCCTCATCGATTTGTAGTAAGGGAAGACGATCGATTGGAAGAATGGTCAAAGACTGATGAATCCAAAAGCTGCACTTTCATCTCTTTGAATTGCAGAGCCGCCCATGAGCTTCCTAAATGCTTGGTATGTCCCCAACTTAAATTTTGTCTATTGGACAGCAACAATCCTTCTTTGAATATCCCGAACACATTTTTCGAAGGGATGAAAGGACTCAAAGTTTTAGATTTGTCCTACATGTGTTTTACAACACTACCTTCATCACTTGATTCCCTTGCAAATCTTCAAACATTATGTCTAGATGGGTGCACGTTGGTAGACATTGCTCTGATTGGAAAGCTAACGAAACTACAAGTTCTTAGCTTGAGGCGTTCTACAATCCAACAATTGCCTAATGAAATGGTGCAATTGACCAATCTAAGGCTGTTGGACTTGAACTATTGCTGGGAACTTGAAGTTATTCCACGGAATATCTTATCAAGTTTGTCTCGATTAGAATGTTTATACATGAATAGGTTTACTCAATGGGCGATTGAAGGTGAAAGCAATGCTTGTTTATCTGAGCTAAATCATTTGTCTCGCTTGACAATTTTAGATTTGGATCTACATATACCAGATATCAAGTTGCTACCAAAAGAATACACGTTCTTGGAGAAGCTAACAAGGTATTCAATATTTATAGGCGATTGGGGGTCCTACCAATATTGTAAAACGTCAAGAACATTAAAGCTCAATGAGGTTGATAGAAGCTTATATGTGGGAGATGGAATTGGCAAGTTATTAAAGAAGACTGAAGAACTAGTGTTAAGGAAATTGATTGGTACTAAAAGTATTCCCTATGAATTAGATGAGGGTTTTTGTGAGCTGAAGCATCTTCACGTTAGTGCAAGTCCAGAGATTCAATATGTCATTGATTCGAAGGATCAACGAGTTCAACAACATGGTGCCTTTCCTTTATTAGAGTCGTTGATTCTTGATGAGTTGATTAACTTGGAAGAAGTGTGTTGTGGCCCAATTCCAGTAAAGTTTTTTGATAACTTAAAAACTCTGGATGTGGAGAAATGTCATGGATTGAAATTTCTCTTTTTACTTTCCATGGCTAGAGGCCTTCTGCAACTTGAAAAAATAGAGATAAAAAGTTGCAATGTCATACAACAAATAGTTGTCTGTGAAAGCGAATCAGAGATAAAAGAAGATGACCATGTTGAGACCAACTTACAACCATTCCCTAAATTACGATCTTTGAAACTTGAGGATCTACCAGAGCTCATGAACTTTGGCTACTTCGACTCTAAGTTGGAAATGACATCGCAAGGAACGTGTTCCCAAGGCAATCTTGATATTCACATGCCGTTTTTCAGATATAAGGTATGTTAA 2811 0.4095 MTEIVSAVVEKVSEYLVAPIGRQLSYLFCYRSHMDELDKKIQELGRVRGDLQITVDAAIRSGDEIRPIVQDWQTRADKKTREAKTFMEDEKNRTKSCFNGWCPNLMSRYQLGREAHKKAQVIAEIREHRNFPDGVSYSAPAPNVTYKNDDPFESRTSILNEIMDALRDDKNSMIGVWGMGGVGKTTLVEQVAARAKQQKLFDRVVMAYVSQTVDLKKIQAQIADALGLKFEEESETGRAGRLSQRLTQEKKLLIILDDLWAGLALKAIGIPSDHRGLKMVLTSRERDVLSREMGTQENFAVGHLPPGEAWSLFKKMTSDSIEKRDLKPTAEKVLEKCAGLPIAIVIVAKALNGKDPIAWKDALRQLTRSIETTVKGIEAKIFLTLELSYNSLYSNEVKSFFLLCGLLPYGDTPIDNLFKYGVGLDWFQNINSLEEAWDRLHTLIDNLKASSLLLESDDDECVRMHDIVRDVARGIASKDPHRFVVREDDRLEEWSKTDESKSCTFISLNCRAAHELPKCLVCPQLKFCLLDSNNPSLNIPNTFFEGMKGLKVLDLSYMCFTTLPSSLDSLANLQTLCLDGCTLVDIALIGKLTKLQVLSLRRSTIQQLPNEMVQLTNLRLLDLNYCWELEVIPRNILSSLSRLECLYMNRFTQWAIEGESNACLSELNHLSRLTILDLDLHIPDIKLLPKEYTFLEKLTRYSIFIGDWGSYQYCKTSRTLKLNEVDRSLYVGDGIGKLLKKTEELVLRKLIGTKSIPYELDEGFCELKHLHVSASPEIQYVIDSKDQRVQQHGAFPLLESLILDELINLEEVCCGPIPVKFFDNLKTLDVEKCHGLKFLFLLSMARGLLQLEKIEIKSCNVIQQIVVCESESEIKEDDHVETNLQPFPKLRSLKLEDLPELMNFGYFDSKLEMTSQGTCSQGNLDIHMPFFRYKVC* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0488 936 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 905 - -
Vvi14g0488 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 404 IPR027417 -
Vvi14g0488 936 Pfam Leucine rich repeat 530 582 IPR001611 GO:0005515
Vvi14g0488 936 Gene3D - 304 392 IPR042197 -
Vvi14g0488 936 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
Vvi14g0488 936 Gene3D - 140 302 IPR027417 -
Vvi14g0488 936 FunFam Probable disease resistance protein At1g61300 147 297 - -
Vvi14g0488 936 PRINTS Disease resistance protein signature 173 188 - -
Vvi14g0488 936 PRINTS Disease resistance protein signature 246 260 - -
Vvi14g0488 936 PRINTS Disease resistance protein signature 613 629 - -
Vvi14g0488 936 PRINTS Disease resistance protein signature 337 351 - -
Vvi14g0488 936 SUPERFAMILY L domain-like 463 896 - -
Vvi14g0488 936 Gene3D Ribonuclease Inhibitor 495 913 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0488 Vvi-Chr14 5563100 5565910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0488 174 633 WRKY Transcription Factor Family AT5G45050 24.752 1.99e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0488 - - vvi:100248775 1868.59