Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0487 ATGTTCAAGAATTTTCACAATCTCAAAGAGTTACATATCATTGATTGTGGGATGGAAGACATGAGAGGTGTCAATACTTCTACTAATGATGAAGTGCTCTTCAATGAAAAGGCTTCATTCCTAGAATCAAGACCCTCCACTCTGAACGATATTATGGATGCCTTAAGAGACGACAATATCAACTTGATTGGAGTATGGGGCATGGCCGGTGTGGGCAAAACAACACTGCTGAAACAAGTGGCTCAACAAGCTAAGCAACAGCGGTTGTTCACCAGACAAGCTTATATGGATGTATCCTGGACTCGAGACTCGGATAAACGTCAAGAAGGAATTGCTAAACTTCGACAAAGAATTGCAAAAGCGTTGGGCTTACCACTTTGGAAGCTCAATGCGGATAAACTGAAGCAGGCACTGAAGGAAGAGAAGATCCTTATTATCTTAGATGATATTTGGACGGAAGTTGATTTGGAGCAAGTCGGAATTCCTTCTAAAGATGATATTTGGACGCAATGCAAAATAGTGTTGGCTTCGAGAGATGGAGACCTATTATGCAAAGGCATGGGCGCACAAATTTGTTTTCCAGTGGAATATTTACCACTAGAAGAAGCTTGGAGTTTGTTTAAGAAGACAGCAGGTGATTCCATGGAGGAGAATCTTGAACTGCAACCCATAGCCATTCAAGTAGTTGAAGAATGTGAGGGTCTACCAATTGCAATTGTAACAATTGCCAAGGCATTAAAAAATGAGACCGTGGCTGTATGGGAGAATGCCTTGGAACAACTTAGGAGTTGTGCACCAACAAACATTAGAGCAGTGGATAGGAAGGTTTACTCATGTCTGGAGTGGAGCTACACCCATTTGAAGGGTGATGACGTTAAGTCATTGTTCTTACTTTGTGGGATGTTGGGCTATGGTGATATTTCATTGGATCTCTTGTTAAGATATGGTATGGGTCTGGATTTGTTTGATCGCATCGACTCATTGGAGCGAGCAAGAAATAGACTACTTGCATTGGTGGAAATCCTCAAAGCCTCAGGCTTGTTACTTGACAGTCATGAAGATACACACATGTTTGATGAAGAAATAGATTCAAGTTTGCTTTTCATGGATGCTGATAACAAGTTTGTGAGGATGCACAGTGTTGTTCGTGAAGTTGCCAGAGCAATTGCATCCAAGGATCCTCATCCATTAGTAGTCAGAGAAGATGTTAGAGTGGAAGAATGGTCAGAGACTGATGAATCCAAAAGGTGCGCTTTCATCTCTTTGCATTGCAAAGCTGTGCATGACCTTCCTCAAGAGTTGGTATGGCCGGAACTTCAATTTTTTCTATTGCAGAACAACAATCCTCCCTTGAATATCCCGAACACATTTTTCGAAGGGATGAAAAAACTCAAAGTTTTGGATTTGTCCCATATGCATTTTACAACACTACCATCATCACTTGATTCCCTTGCAAATCTCCGAACATTGCATCTGGATGGGTGCGAGTTGGGAGACATTGCTCTAATTGGAAAGCTAACGAAACTAGAAGTTCTTAGCTTGGTGGGTTCTACAATCCAACGATTGCCTAAAGAAATGATGCAACTAACTAATCTAAGACTCTTGGATTTGGATTATTGCAAGAAGCTTGAAGTAATTCCACGAAATATCTTATCAAGTTTGTCTCGATTAGAATGTTTGAGCATGATGTCTGGCTTTACTAAATGGGCAGTTGAAGGTGAAAGCAATGCTTGTTTATCAGAGCTAAATCATTTGTCTTATTTGACAACTTTATTTATAGAAATACCAGATGCTAAGTTGCTACCAAAAGACATTCTATTTGAGAACTTGACAAGATATGTGATATCTATAGGTAATTGGGGGGGGTTCAGAACCAAAAAAGCATTGGCGCTCGAAGAAGTCGATAGAAGCTTATATTTGGGGGATGGAATAAGCAAGTTGTTGGAGAGAAGTGAAGAACTAAGGTTCTGGAAATTAAGTGGTACTAAATATGTGCTTTACCCATCAAATAGGGAGAGTTTTCGTGAACTGAAGCATCTTGAAGTTTTTTACAGTCCCGAGATTCAATATATCATTGATTCAAAGGATCAATGGTTTCTGCAACATGGTGCTTTTCCTCTATTGGAGTCATTGATTCTTGATACTCTGGAAATTTTTGAAGAAGTATGGCATGGCCCAATTCCAATAGGGTCTTTTGGTAACTTAAAAACTCTAGAAGTGGAGTCATGTCCTAAATTGAAATTTCTCCTTCTGTTTTCCATGGCTAGAGGCTTTTCCCAACTTGAAGAAATGACAATAGAAGATTGCGATGCCATGCAACAAATAATCGCATATGAAAGGGAGTCAGAAATAGAAGAAGATGGACATGTTGGGACCAACTTGCAACTATTCCCTAAATTGCGATCCTTGAAACTCAAGAATCTACCACAGCTCATCAACTTCAGTTCCGAGTTAGAAACAACATCTTCCACATCTTTGAGTACAAATGCAAGGTCGGAAGACTCATTTTTTAGTCATAAGGTTTCATTCTCTAAGTTAGAGGAGTTGACACTCAAAGATTTGCCCAAGCTAAAGGATATATGGCATCATCAACTTCCATTTGAATCCTTCTCCAATCTACAGATCTTAAGGGTGTACGGATGTCCATGTCTACTCAATCTTGTCCCAGCTCATTTGATACACAACTTCCAGAATTTAAAAGAGATGGATGTGCAAGATTGTATGCTCCTAGAGCATGTGATTATTAATCTTCAAGAAATTGATGGAAATGTCGAGATCCTCCCAAAGTTAGAAACCTTGAAATTGAAGGACTTGCCTATGCTAAGATGGATGGAAGACGGGAATGACAGGATGAAACATATTTCCTCTCTTCTGACACTCATGAATATTCAAAACCTTCAAGAACTACATATCACTAATTGTAGTATGGAAGACCTACGGAAGATGTAG 2949 0.3961 MFKNFHNLKELHIIDCGMEDMRGVNTSTNDEVLFNEKASFLESRPSTLNDIMDALRDDNINLIGVWGMAGVGKTTLLKQVAQQAKQQRLFTRQAYMDVSWTRDSDKRQEGIAKLRQRIAKALGLPLWKLNADKLKQALKEEKILIILDDIWTEVDLEQVGIPSKDDIWTQCKIVLASRDGDLLCKGMGAQICFPVEYLPLEEAWSLFKKTAGDSMEENLELQPIAIQVVEECEGLPIAIVTIAKALKNETVAVWENALEQLRSCAPTNIRAVDRKVYSCLEWSYTHLKGDDVKSLFLLCGMLGYGDISLDLLLRYGMGLDLFDRIDSLERARNRLLALVEILKASGLLLDSHEDTHMFDEEIDSSLLFMDADNKFVRMHSVVREVARAIASKDPHPLVVREDVRVEEWSETDESKRCAFISLHCKAVHDLPQELVWPELQFFLLQNNNPPLNIPNTFFEGMKKLKVLDLSHMHFTTLPSSLDSLANLRTLHLDGCELGDIALIGKLTKLEVLSLVGSTIQRLPKEMMQLTNLRLLDLDYCKKLEVIPRNILSSLSRLECLSMMSGFTKWAVEGESNACLSELNHLSYLTTLFIEIPDAKLLPKDILFENLTRYVISIGNWGGFRTKKALALEEVDRSLYLGDGISKLLERSEELRFWKLSGTKYVLYPSNRESFRELKHLEVFYSPEIQYIIDSKDQWFLQHGAFPLLESLILDTLEIFEEVWHGPIPIGSFGNLKTLEVESCPKLKFLLLFSMARGFSQLEEMTIEDCDAMQQIIAYERESEIEEDGHVGTNLQLFPKLRSLKLKNLPQLINFSSELETTSSTSLSTNARSEDSFFSHKVSFSKLEELTLKDLPKLKDIWHHQLPFESFSNLQILRVYGCPCLLNLVPAHLIHNFQNLKEMDVQDCMLLEHVIINLQEIDGNVEILPKLETLKLKDLPMLRWMEDGNDRMKHISSLLTLMNIQNLQELHITNCSMEDLRKM* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0487 982 Gene3D - 24 191 IPR027417 -
Vvi14g0487 982 Pfam NB-ARC domain 47 284 IPR002182 GO:0043531
Vvi14g0487 982 Gene3D Ribonuclease Inhibitor 578 788 IPR032675 -
Vvi14g0487 982 SUPERFAMILY L domain-like 377 812 - -
Vvi14g0487 982 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 837 975 - -
Vvi14g0487 982 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Vvi14g0487 982 Gene3D - 198 287 IPR042197 -
Vvi14g0487 982 SMART AAA_5 59 193 IPR003593 GO:0016887
Vvi14g0487 982 PRINTS Disease resistance protein signature 232 246 - -
Vvi14g0487 982 PRINTS Disease resistance protein signature 137 151 - -
Vvi14g0487 982 PRINTS Disease resistance protein signature 527 543 - -
Vvi14g0487 982 PRINTS Disease resistance protein signature 62 77 - -
Vvi14g0487 982 Coils Coil 325 345 - -
Vvi14g0487 982 Gene3D Ribonuclease Inhibitor 790 982 IPR032675 -
Vvi14g0487 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 299 IPR027417 -
Vvi14g0487 982 Gene3D Ribonuclease Inhibitor 400 577 IPR032675 -
Vvi14g0487 982 SUPERFAMILY L domain-like 796 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0487 Vvi-Chr14 5552260 5557603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0487 59 547 WRKY Transcription Factor Family AT5G45050 21.389 7.89e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0487 - - vvi:100248775 1919.44