Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0474 ATGACAGAGATCATTAATGCCGTTGCTGCAAAAGTTTCAGAGTACTTGGTTGCTCCAATTGGACGCCATCTTGGTTATCTGTTTTGCTATCGGAGCTATACCGATGAACTCCACAACAAAGCTCAGAAGCTGGGGAAGGCGAGGGATGACGTGCTGATAACTGTTGATGAAGCTAGGAGAAGAGGGGATGAAATCAGACCTATTGTTCAGGAGTGGCTGAATCGGGTAGATGAGGTTACAGGGGAGGCAGAGGAATTGAAGAAAGATGAAAACAAGAGTTGTTTCCATGGGTGGTGTCCTAATCTCAAGTCACGGTACCTGCTAAGCAGGGAAGCAGACAAGAAGGCGCAGGTTATTGTTGAAGTCCAAGAAGACCGCAATTTCCCCGATGGCGTATCATATCGTGTCCCTCTACGGAATGTAACCTTTAAAAATTATGAACCTTTTGAGTCAAGAGCCTCGACTGTGAACAAAGTTATGGATGCATTAAGAGATGATGAGATCAACAAGATTGGGGTATGGGGCATGGGCGGTGTGGGCAAAACCACGCTGGTCAAACAAGCGTCCCAACTAGCTGAAGATGAGAAGCTGTTCACCACACGAGTCTACATAGATGTATCCTGGACTCGAGATTCGGAAAAACTTCAAGATGGAATTGCTAAAATTCAACAAAAAATTGCAGACATGTTAGGCTTGGAATTTAAGGGGAAGGACGAATCCACAAGAGCAGTTGAACTGAAGCAGAGACTGCAGAAAGAAAAGATCCTTATCATCTTAGATGACATTTGGAAGGAAGTTAGTTTGGAGGAAGTTGGAATTCCTTCTAAAGATGACCAGAAAGGATGCAAAATAGTGTTGGCTTCTAGAAATGAAGACCTATTACGCAAAGACATGGGCGCAAAAGAGTGTTTTCCACTTCAACATCTACCAAAAGAGGAAGCTTGGCATTTATTTAAGAAGACAGCAGGTGATTCTGTGGAGGGGGATAAACTGCGACCCATAGCAATTGAGGTAGTTAACGAATGTGAGGGTCTACCAATTGCAATTGTAACAATTGCAAATGCATTAAAAGATGAAAGTGTGGCTGTATGGGAGAATGCTTTGGACGAACTGAGGAGTGCTGCGCCAACAAACATCGGCGGAGTGGATGACAAGGTCTACGGATGTCTGAAGTGGAGCTACAAGCATTTGAAAGGTGATGAAGTCAAGTCATTGTTCTTACTTTGTGGTTGGTTGAGCTATGGTGATATTTCAATGGATCGCTTGTTAAGGTATGCTATGGGTTTGGATTTGTTTGACCACATCAAGTCATTGGAGCAAGCAAGAAATAAACTAGTTACATTGGTGAGAACCCTCAAAGCCTCAAGCTTGTTACTTGACGGTGAAGATCATATAAACCCTTTTGGAGGAGGAGCCTCGAGGTTGCTTTTCATGGATGCTGATAACAAGTCTGTCAGGATGCATGATGTTGTTCGTGATGTTGCCAGAAATATTGCATCCAAGGATCCTCATCGATTTGTAGTTAGAGAAGACGGTGAAGAATGGTCAGAGACTGATGGATCCAAATACATCTCTTTAAATTGCAAAGATGTGTATGAGCTTCCTCACAGGTTGGTATGTCCGAAACTTCAATTTTTACTATTGCAGAACGGTCCTTCCTTGAAAATCCCACACACATTTTTTGAAGGGATGAACCTACTCAAAGTTTTAGACTTGTCTGAAATGCATTTCACAACACTACCTTCAACGCTTCATTCCCTTCCAAATCTTCGAACATTACGTCTAGACCGGTGTGAGTTGGGAGACATAGCTCTAATTGGAGAGCTAAAGAAACTACAAGTTCTTAGCATGGTGGGTTCCGATATCCAACAACTGCCTAGTGAAATGGGGCAGTTGACGAATCTAAGGTTGTTGGATTTGAATGATTGTAAGCAGCTTGAAGTAATTCCACGAAATATCTTATTAAGCTTGTCTCGATTAGAATGTTTGTGCATGAAATCTAGCTTTACTCAATGGGCAGCTGAAGGAATTAGTGATGGAGAAAGCAATGCTTGTTTATCGGAGCTGAATCATTTGCGCAATTTGACAACTATAGAGATAGAAGTGCCAGCTGTCGAGTTGCTACCAAAAGAAGACATGTTCTTTGAGAACTTGACAAGATATGCAATATTTGCTGGCAGAGTTTATTCATGGGAAAGAAATTATAGAACATCAAAAACATTAAAGCTGGAACAGGTTGATAGAAGCTTACTTTTGAGGGATGGAATTGGAAAGTTGTTGAAGAAAACTGAAGAACTAAAGTTGAGTAATTTGGAAGAAGTATGTCGTGGCCCAATTCCCCTAAGGTCGTTGGATAACTTGAAAATTTTAGATGTGGAGAAATGTCATGGATTGAAATTTCCCTTCTTACTTTCCACAGCTAGAGGCCTTTCCCAACTAGAAGAAATGACAATAAATGATTGCAATGCCATGCAACAAATAATCGAATGTGAAGGGGAGTTTGAAATAAAAGAAGTTGATCATGTTGGGACCGACTTGCAACTGCTCCCTAAATTACGACTTTTGGAACTTAGGGATCTACTAGAGCTCATGAATTTCGACTACTTCGGCTCTAATTTGGAAACGACATCGCAAGAAACATGTTCCCAAGGCAATCCTGATATCCACATGCCATTTTTCAGTTATCAGGTTTCATTCCCTAATTTGGAGAAGTTGATACTTCATAATCTTCCCAAATTGAGGGAGATATGGCATCACCAACTTCCACTTGGGTCCTTCTACAATTTGCAAATCCTAAAAGTTTACTCTTGTCCATGCCTACTCAATCTTATTCCGTCTCATTTGATACAGAGATTCGACAATTTGAAAGAGATGGACGTAGATAACTGTGAAGCCCTAAAACATGTGTTTGATCTTCAAGGACTTGATGAAAATATTAGGATTCTCCCAAGGTTAGAATCCTTATGGTTATGGACACTACCTAAGTTGAGGCGTGTTGTGTGCAATGAGGATGAGGACAAGAATGATAGCGTGAGGTGTCTTTTCTCTTCTTCCACGGCTTTTCACAACCTTAAATTCCTATCCATCCAAGATTATGGGAACAAAGTTGAAGATGAGGAACATATCAATACTCCTAGGGAAGATGTAGTGCTCTTCGATGGAAAGGTTTCATTCCCTAATTTGGAGGAGTTAACACTCGATGGTCTTCCCAAGTTGACGATGATATGGCATCATCAACTTTCACTTGAATCCTTCCGTAGATTAGAGATCCTAAGTGTGTGTAATTGTCCACGCCTTTTATCTTTTTCCAAGTTCAAGGATTTTCATCACCTCAAAGACTTAAGTATCATTAATTGTGGGATGCTCTTGGATGAAAAGGTTTCATTCTCTCCTAATTTGGAGGAGTTGTATCTAGAAAGTCTTCCAAAGTTGAAGGAGATAGATTTTGGGATCCTCCCAAAGTTAAAAATCCTAAGGTTAGAGAAACTACCTCAACTAAGATATATTATATGCAAGGGTAAGAATATCAGCAAGAGATGTGTTTTGTCTCCTTCAATGTTCAAGAATTTTCACAATCTCATAAAGTTACATATCATTGATTGTGGGATGGAAGACACCAGAAGTGTCAATACTTCTACTAATGATGAAGTGCTCTCCAATGAAAAGGCTTCATTCCTTGAATCAAGAGCCTCCACTTTGAACAAAATTATTGATGCCTTAAGAGACGAGAATATCAACTTGATTGGAGTATGGGGCATGGGCGGTGTGGGCAAAACAACACTGTTGAAACAAGTGGCTCAACAAGCTAAGCAACACCATTTGTTCAATAGACAAGCCTATATTGATTTATCTTCCATTCCAGACTCGGAAAATCTTCGACAAAGAATTGCAAAAGCGTTGGGCTTCACACTTAGGAGGAAGGATGAATCCAGAAGAGCGGATGAATTGAAGCAGAAACTGAAGCAGAGACTGAAGGAAGGGAAGATCCTTATTATCTTAGATGATATTTGGACGGAAGTTGATTTGGAGGAAGTAGGAATTCCTTCTAAAGGCGATGAGACACAATGCAAAATAGTGTTGGCTTCGAGAGATGGAGACCTATTATGCAAATACATGGGCGCACAAATTTGTTTTCAGGTGGAACATTTACCACTAGAAGAAGCTTGGAGTCTTTTTAAGAAGACAACAGGTGATTCCGTGGAGGAGAATCTTGAACTGCAACCCATAGCCATTCAAGTAGTTGAAGAATGTGAGGGTCTGCCAATTGCAATTGTAACAATTGCAAAGGCATTAAAAGATGAGACTGTGGCTGTATGGAAGAATGCCTTGGAACAACTCAGGAGTTGTGCACTAACAAACATTAGAGCAGTGGATAAGGTTTACTCATGTCTGGAGTGGAGCTACACCCATTTGAAGGGTATTGACGTTAAGTCATTGTTCTTACTTTGTGGGATGCTGGACCATAGTGATATTTCATTGGATCTCTTGTTACGATATGGTATGGGTCTGGATTTGTTTGGCCACATCGACTCATTGGAGCAAGCAAGAAATAAACTACTTGCATTGGTGGAAATCCTTAGAGCCTCAGGCTTGTTACTTGACTGTCATGAAGATAGACACAATTGTAATGTAGAAAGAGCTTCAAGTTTGCTTTTCATGGACGCTAATAACAAGTTTGTGAGGATGCATAGTGTTGTTCGTGAAGTTGCCAGGGCAATTGCATCCAAGGATCCTCATCCATTTGTAGTTAGAGAAGATGTTGGATTTGAAGAATGGTCAGAGACTGATGACTCCAAAATGTGCACTTTCATCTCTTTGAATTGCAAAGTTGTGCGTGAGCTTCCTCAAGGGTTGGTATGTCCGGACCTTCAATCTTTTCTATTGCATAGCAAAAATCCTTCATTGAATATCCCGAACACATTTTTCGAAGGGATGAAAAAACTCAAAGTTTTGGATTTGTCCCATATGCATTTTACAACATTACCTTCATCACTTGATTTCCTTGCAAATCTCCGAACATTGTGTCTAGATGGGTGCGAGTTGGGAGACATTGCTCTAATTGGAAAACTAACGAAACTAGAAGTTCTTAGCTTGGTGGGTTCTACAATCCAACAATTGCCTAATGAAATGGTGCAATTGACCAATCTAAGGTTGTTGGACTTGAATGATTGCAAACAACTTGAAGTCATTCCACGAAATATCTTATCAAGTTTGTCTCGATTGGAATGTTTGAGTATGATATCTAGCTTTACTAAATGGGCGGTTCAAGGTGAAAGCAATGCTTGTTTATCTGAGCTAAATCATTTGTCTTATTTGACAACTTTATCTATAAAAATACCAGATGCTAAGTTGCTACCAAAAGACATTCTATTTGAGAACTTGACAAGGTATGTGATATCTATGGGTAATTGTTGGGGGTTGAGAACCAAAAGAGCATTGAAGCTCAAGAAAGTCAATAGAAGCTTATACTTGGGGGATGGAATTAGCAAGTTGTTGGAGAGAAGTGAAGAACTAGAGTTCTGGGAATTAAGTGGTACTAAATATGTTCTTTATCCATCAGTATAG 5565 0.402 MTEIINAVAAKVSEYLVAPIGRHLGYLFCYRSYTDELHNKAQKLGKARDDVLITVDEARRRGDEIRPIVQEWLNRVDEVTGEAEELKKDENKSCFHGWCPNLKSRYLLSREADKKAQVIVEVQEDRNFPDGVSYRVPLRNVTFKNYEPFESRASTVNKVMDALRDDEINKIGVWGMGGVGKTTLVKQASQLAEDEKLFTTRVYIDVSWTRDSEKLQDGIAKIQQKIADMLGLEFKGKDESTRAVELKQRLQKEKILIILDDIWKEVSLEEVGIPSKDDQKGCKIVLASRNEDLLRKDMGAKECFPLQHLPKEEAWHLFKKTAGDSVEGDKLRPIAIEVVNECEGLPIAIVTIANALKDESVAVWENALDELRSAAPTNIGGVDDKVYGCLKWSYKHLKGDEVKSLFLLCGWLSYGDISMDRLLRYAMGLDLFDHIKSLEQARNKLVTLVRTLKASSLLLDGEDHINPFGGGASRLLFMDADNKSVRMHDVVRDVARNIASKDPHRFVVREDGEEWSETDGSKYISLNCKDVYELPHRLVCPKLQFLLLQNGPSLKIPHTFFEGMNLLKVLDLSEMHFTTLPSTLHSLPNLRTLRLDRCELGDIALIGELKKLQVLSMVGSDIQQLPSEMGQLTNLRLLDLNDCKQLEVIPRNILLSLSRLECLCMKSSFTQWAAEGISDGESNACLSELNHLRNLTTIEIEVPAVELLPKEDMFFENLTRYAIFAGRVYSWERNYRTSKTLKLEQVDRSLLLRDGIGKLLKKTEELKLSNLEEVCRGPIPLRSLDNLKILDVEKCHGLKFPFLLSTARGLSQLEEMTINDCNAMQQIIECEGEFEIKEVDHVGTDLQLLPKLRLLELRDLLELMNFDYFGSNLETTSQETCSQGNPDIHMPFFSYQVSFPNLEKLILHNLPKLREIWHHQLPLGSFYNLQILKVYSCPCLLNLIPSHLIQRFDNLKEMDVDNCEALKHVFDLQGLDENIRILPRLESLWLWTLPKLRRVVCNEDEDKNDSVRCLFSSSTAFHNLKFLSIQDYGNKVEDEEHINTPREDVVLFDGKVSFPNLEELTLDGLPKLTMIWHHQLSLESFRRLEILSVCNCPRLLSFSKFKDFHHLKDLSIINCGMLLDEKVSFSPNLEELYLESLPKLKEIDFGILPKLKILRLEKLPQLRYIICKGKNISKRCVLSPSMFKNFHNLIKLHIIDCGMEDTRSVNTSTNDEVLSNEKASFLESRASTLNKIIDALRDENINLIGVWGMGGVGKTTLLKQVAQQAKQHHLFNRQAYIDLSSIPDSENLRQRIAKALGFTLRRKDESRRADELKQKLKQRLKEGKILIILDDIWTEVDLEEVGIPSKGDETQCKIVLASRDGDLLCKYMGAQICFQVEHLPLEEAWSLFKKTTGDSVEENLELQPIAIQVVEECEGLPIAIVTIAKALKDETVAVWKNALEQLRSCALTNIRAVDKVYSCLEWSYTHLKGIDVKSLFLLCGMLDHSDISLDLLLRYGMGLDLFGHIDSLEQARNKLLALVEILRASGLLLDCHEDRHNCNVERASSLLFMDANNKFVRMHSVVREVARAIASKDPHPFVVREDVGFEEWSETDDSKMCTFISLNCKVVRELPQGLVCPDLQSFLLHSKNPSLNIPNTFFEGMKKLKVLDLSHMHFTTLPSSLDFLANLRTLCLDGCELGDIALIGKLTKLEVLSLVGSTIQQLPNEMVQLTNLRLLDLNDCKQLEVIPRNILSSLSRLECLSMISSFTKWAVQGESNACLSELNHLSYLTTLSIKIPDAKLLPKDILFENLTRYVISMGNCWGLRTKRALKLKKVNRSLYLGDGISKLLERSEELEFWELSGTKYVLYPSV* 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0474 1854 Coils Coil 69 89 - -
Vvi14g0474 1854 Gene3D Ribonuclease Inhibitor 1056 1213 IPR032675 -
Vvi14g0474 1854 Pfam NB-ARC domain 1231 1469 IPR002182 GO:0043531
Vvi14g0474 1854 Pfam NB-ARC domain 154 395 IPR002182 GO:0043531
Vvi14g0474 1854 Coils Coil 1223 1243 - -
Vvi14g0474 1854 Gene3D - 1214 1381 IPR027417 -
Vvi14g0474 1854 Coils Coil 1509 1529 - -
Vvi14g0474 1854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 409 IPR027417 -
Vvi14g0474 1854 FunFam Probable disease resistance protein At1g61300 1211 1376 - -
Vvi14g0474 1854 SMART LRR_typ_2 632 656 IPR003591 -
Vvi14g0474 1854 SMART LRR_typ_2 587 609 IPR003591 -
Vvi14g0474 1854 SMART LRR_typ_2 1713 1737 IPR003591 -
Vvi14g0474 1854 SMART LRR_typ_2 1690 1712 IPR003591 -
Vvi14g0474 1854 SMART LRR_typ_2 1645 1668 IPR003591 -
Vvi14g0474 1854 SMART LRR_typ_2 564 586 IPR003591 -
Vvi14g0474 1854 Gene3D Ribonuclease Inhibitor 514 993 IPR032675 -
Vvi14g0474 1854 Pfam Leucine rich repeat 541 600 IPR001611 GO:0005515
Vvi14g0474 1854 Pfam Leucine rich repeat 1623 1681 IPR001611 GO:0005515
Vvi14g0474 1854 Gene3D Ribonuclease Inhibitor 1594 1848 IPR032675 -
Vvi14g0474 1854 FunFam Probable disease resistance protein At1g61300 138 302 - -
Vvi14g0474 1854 Coils Coil 1306 1326 - -
Vvi14g0474 1854 SMART AAA_5 167 312 IPR003593 GO:0016887
Vvi14g0474 1854 SMART AAA_5 1244 1378 IPR003593 GO:0016887
Vvi14g0474 1854 PRINTS Disease resistance protein signature 1323 1337 - -
Vvi14g0474 1854 PRINTS Disease resistance protein signature 1711 1727 - -
Vvi14g0474 1854 PRINTS Disease resistance protein signature 1417 1431 - -
Vvi14g0474 1854 PRINTS Disease resistance protein signature 1247 1262 - -
Vvi14g0474 1854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1483 IPR027417 -
Vvi14g0474 1854 Gene3D - 1383 1471 IPR042197 -
Vvi14g0474 1854 Gene3D - 308 397 IPR042197 -
Vvi14g0474 1854 Gene3D - 135 303 IPR027417 -
Vvi14g0474 1854 SUPERFAMILY L domain-like 1561 1790 - -
Vvi14g0474 1854 SUPERFAMILY L domain-like 486 1171 - -
Vvi14g0474 1854 SUPERFAMILY RNI-like 748 1032 - -
Vvi14g0474 1854 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 883 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0474 Vvi-Chr14 5381946 5392623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0474 167 650 WRKY Transcription Factor Family AT5G45050 21.982 1.65e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0474 - - vvi:100251264 3650.14