Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0469 ATGGGTTTGGATTTGTTTGACCACCTCAAGTCATTGGAGCAAGCAAGAAATAAACTAGTTACATTGGTGAGAACCCTCAAAGCCTCAAGCTTGTTACTTGACGGTGAAGATCATATAAACCCTTTTAGACGAGGAGCCTCGAGGTTGCTTTTCATGGATGCTGATAACAAGTCTGTCAGGATGCATGATGTTGTTCGTGATGTTGCCAGAAATATTGCATCCAAGGATTTTCATCGATTTGTAGTTAGAGAAGATGATGAAGAATGGTCAAAGACTGATGAATTCAAATACATCTCTTTAAATTGCAAAGATGTGCATGAGCTTCCTCACAGGTTGGTATGTCCAAAACTTCAATTTTTACTATTGCAGAACATCAGTCCTACCTTGAATATCCCACACACATTTTTTGAAGCGATGAACCTACTCAAAGTTTTAGACTTGTCTGAAATGCATTTCACAACACTACCTTCAACGCTTCATTCCCTTCCAAATCTTCGAACATTACGTCTAGACGGGTGCGAGTTGGGAGACATAGCTCTAATTGGAGAGCTAAAGAAACTACAAGTTCTTAGCATGGTGGGTTCCGATATCCGACGATTGCCTAGTGAAATGGGGCAGTTGACGAATCTAATGTTGTTGGATTTGAACGATTGTCGGCAGCTTGATGTAATTCCACGAAATATCTTATCAAGCCTGTCTCGATTAGAATGTTTGCGCATGAAATCTAGCTTTACTCGATGGGCAGCTGAAGGAGTTAGTGATGGAGAAAGCAATGCTTGTTTATCGGAGCTGAATCATTTGCACCATTTGACAACTATAGAGATAGAAGTGCCAGCTGTCAAGTTGCTACCAAAAGAAGACATGTTCTTTGAGAACTTGACAAGATATGCAATATTTGCAGGCAGAGTTTATTCATGGGAAAGAAATTATAAAACATCAAAAACATTAAAGCTGGAACAGGTTGATAGGAGCTTACTTTTGAGGGATGGAATTAGAAAGTTGTTGAAGAAAACTGAAGAACTAAAGTTGAGTAAATTGGAAAAAGTATGTCGTGGCCCAATTCCCCTAAGGTCGTTGGATAACTTGAAAATTTTAGATGTGGAGAAATGTCATGGATTGAAATTTCTCTTCTTACTTTCCACAGCTAGAGGCCTTTCCCAAGTAGAAGAAATGACAATAAATGATTGCAATGCCATGCAACAAATAATCGCATGTGAAGGGGAGTTTGAAATAAAAGAAGTTGATCATGTTGGGACCGACTTGCAACTGCTCCCTAAATTACGACTTTTGAAACTTAGGGATCTACCAGAGCTCATGAATTTCGACTACTTCGGCTCTAATTTGGAGACGACATCGCAAGAAACATGTTCCCAAGGCAATCCTAATATCCACATGCCATTTTTCAGTTATCAGGTTTCATTCCCTAATTTGGAGAAGTTGATGCTTTATAATCTTCTCGAATTGAAGGAGATATGGCATCACCAACTTCCACTTGGGTCCTTCTACAATTTGCAAATCCTACAAGTAAACCATTGTCCAAGCCTACTCAATCTTATTCCATCTCATTTGATACAAAGTTTCGACAATTTGAAAAAATTAGAGGTGGCTCACTGTGAAGTCCTAAAACATGTGTTTGATCTTCAAGGACTTGATGGAAATATTAGGATTCTCCCAAGGTTAAAATCCTTACAGTTAAAAGCACTACCTAAGTTGAGGCGTGTTGTGTGCAATGAGGATGAGGACAAGAATGATAGCGTGAGGTGTCTTTTCTCTTCTTCCATTCCTTTTCACAACCTTAAATTCCTATACATTCAAGATTGTGGGAACGAAGTTGAAGATGAGGAACATATCAATACTCCTACAGAAGATGTAGTGCTCTCCGATGGAAAGGTTTCACTTTCTCCTAATTTGGAGGAGATAGTTCTAAAAAGTCTTCCAAAATTGAAGGAGATAGATTTTGGGATCCTCCCAAAGTTAAAAATCCTAAAGATTGAGAAACTACCTCAATTAATTTTGTCTTCTTCAATGTTCAAGAATTTTCACAATCCCAAAGAGTTACATATCATTGATTGTGGGATGGAAGACATGAGAGATGTCAATACTTCTACTAATGATGAAGTGCTCTTCAATGAAAAGGCTTCATTCCTTGAATCAAGAGCCTCCACTTTGAACAAAATTATGGATGCCTTAAGAGCCGACAATATCAACTTGATTGGAGTATGGGGCATGGCCGGTGTGGGCAAAACAACACTGCTGAAACAAGTGGCTCAACAAGCTAAGCAACAGCGGTTGTTCACCAGACAAGCTTATATGAATGTATCCTGGACTCGAGACTCGGATAAACGTCAAGAAGGAATTGCTAAACTTCGACAAAGAATTGCAAAAACGTTGGGCTTACCACTTTGGAAGCTCAATGCGGATAAACTGAAGCAGGCACTGAAGGAAGAGAAGATCCTTATTATCTTAGATGATATTTGGACGGAAGTTGATTTGGAGCAAGTCGGAATTCCTTCTAAAGATGATATTTGGATGCAATGCAAAATAGTGTTGGCTTCGAGAGATAGAGACCTATTATGCAAAGGCATGGGCGCACAAATTTGTTTTCCAGTGGAATATTTACCACTAGAAGAAGCTCGGAGTTTGTTTAAGAAGACAGCAGGAGATTCCATGGAGGAGAATCTTGAACTGCGACCCATAGCCATTCAAGTAGTTGAAGAATGTGAGGGTCTACCAATTGCAATTGTAACAATTGCCAAGGCATTAAAAGATGAGACCGTGGCTGTATGGAAGAATGCCTTGGAACAACTCAGGAGTTGTGCACCAACAAACATTAGAGCAGTGGATAAGAAGGTTTACTCATGTCTGGAGTGGAGCTACACCCATTTGAAGGGTGATGACGTTAAGTCATTGTTCTTACTTTGTGGGATGCTGAGCTATGGTGATATTTCATTGGATCTCTTGTTACGATATGGTATGGGTCTGGATTTGTTTGACCGCATCGACTCATTGGAGCGAGCAAGAAATAGACTACTTGCATTGGTGGAAATCCTCAAAGCCTCAGGCTTGTTACTTGACAGTCATGAAGATAGAAACAAGTTTGATGAAGAAAGAGCTTCAAGTTCGAGTTTCATGGATGTTGATAACAAGTTTGTGAGGATGCAGAGTGTTGTTCGTGAAGTTGCCAGAGCAATTGCATCCAAGGATCCTCATCCATTTGTAGTAAGAGAAGATGTTGGATTGGAAGAATGGTCAGAGACTGATGAATCCAAAAGGTGCGCTTTCATCTCTTTGCATTGCAAAGCTGTGCATGACCTTCCTCAAGAGTTGGTATGGCCGGAACTTCAATTTTTTCTATTGCAGAACAATAATCCTCTCTTGAATATCCCGAACACATTTTTCGAAGGGATGAAAAAACTCAAAGTTTTGGATTTGTCCCGTATGCATTTTACAACACTACCATCATCACTTGATTCCCTTGCAAATCTCCGAACATTGCGTCTGGATGGGTGCAAGTTGGGAGACATTGCTCTAATTGGAAAGCTAACGAAACTAGAAGTTCTTAGCTTGATGGGTTCTACAATCCAACAATTGCCTAATGAAATGTCGCGATTGACCAATCTAAGGCTGTTGGATTTGAATGATTGTGAGAAGCTTGAAGTAATTCCACGAAATATCTTATCAAGTTTGTCTCAATTAGAATGTTTGTACATGAAATCTAGCTTTACTCAATGGGCAACTGAAGGTGAAAGCAATGCTTGCTTATCCGAGCTAAATCATTTGTCTCATTTGACAACTTTAGAGACATATATACGAGATGCCAAGTTGCTACCAAAAGACATTCTATTTGAGAACTTGACAAGATATGGGATATTTATAGGTACTCAGGGGTGGTTGAGAACCAAAAGAGCATTGAAGCTTTGGAAAGTCAATAGAAGCTTACATTTGGGGGATGGAATGAGCAAGTTGTTGGAGAGAAGTGAAGAACTAGAGTTCAGTCAATTAAGTGGTACTAAATATGTTCTTCACCCATCAGATAGGGAGAGTTTCCTTGAACTAAAGCATCTCAAAGTTGGTTATAGTCCTGAGATTCAATACATCATGGATTCAAAGAATCAACAGTTGTTGCAACATGGTGCCTTTCCTCTATTGGAGTCATTGATTCTTCAGACTTTGAAAAACTTCGAAGAAGTATGGCATGGCCCAATTCCAATAGGGTCTTTTGGTAACTTAAAAACTCTAGAAGTGAATTTATGTCCTAAATTGAAATTTCTCCTCTTGCTTTCCACGGCTAGAGGCCTTTCTCAACTTGAAGAAATGATTATATCATATTGCGATGCCATGCAACAAATAATCGCATATGAAAGGGAGTCAAAAATAAAAGAAGATGGACATGCTGGGACCAACTTGCAACTATTCACAAAATTGCGATCCTTGAAACTCGAGGGACTACCACAGCTCATCAACTTCAGTTCCGAGTTAGAAACAACATCTTCCACATCTTTGAGTACAAATGCAAGGTCGGAAGACTCATTTTTCAGTCATAAGCACCCATCAAGAATAACACTACAACAAATTTCATATTTTGCTACCATAATTTTAGGCACAAATAATTTTATGGAAAAAAAAGTAGATTTTTATAATAAATTTTATTTTAATGTCAAAAAGGATTTTTGTTAG 4677 0.3889 MGLDLFDHLKSLEQARNKLVTLVRTLKASSLLLDGEDHINPFRRGASRLLFMDADNKSVRMHDVVRDVARNIASKDFHRFVVREDDEEWSKTDEFKYISLNCKDVHELPHRLVCPKLQFLLLQNISPTLNIPHTFFEAMNLLKVLDLSEMHFTTLPSTLHSLPNLRTLRLDGCELGDIALIGELKKLQVLSMVGSDIRRLPSEMGQLTNLMLLDLNDCRQLDVIPRNILSSLSRLECLRMKSSFTRWAAEGVSDGESNACLSELNHLHHLTTIEIEVPAVKLLPKEDMFFENLTRYAIFAGRVYSWERNYKTSKTLKLEQVDRSLLLRDGIRKLLKKTEELKLSKLEKVCRGPIPLRSLDNLKILDVEKCHGLKFLFLLSTARGLSQVEEMTINDCNAMQQIIACEGEFEIKEVDHVGTDLQLLPKLRLLKLRDLPELMNFDYFGSNLETTSQETCSQGNPNIHMPFFSYQVSFPNLEKLMLYNLLELKEIWHHQLPLGSFYNLQILQVNHCPSLLNLIPSHLIQSFDNLKKLEVAHCEVLKHVFDLQGLDGNIRILPRLKSLQLKALPKLRRVVCNEDEDKNDSVRCLFSSSIPFHNLKFLYIQDCGNEVEDEEHINTPTEDVVLSDGKVSLSPNLEEIVLKSLPKLKEIDFGILPKLKILKIEKLPQLILSSSMFKNFHNPKELHIIDCGMEDMRDVNTSTNDEVLFNEKASFLESRASTLNKIMDALRADNINLIGVWGMAGVGKTTLLKQVAQQAKQQRLFTRQAYMNVSWTRDSDKRQEGIAKLRQRIAKTLGLPLWKLNADKLKQALKEEKILIILDDIWTEVDLEQVGIPSKDDIWMQCKIVLASRDRDLLCKGMGAQICFPVEYLPLEEARSLFKKTAGDSMEENLELRPIAIQVVEECEGLPIAIVTIAKALKDETVAVWKNALEQLRSCAPTNIRAVDKKVYSCLEWSYTHLKGDDVKSLFLLCGMLSYGDISLDLLLRYGMGLDLFDRIDSLERARNRLLALVEILKASGLLLDSHEDRNKFDEERASSSSFMDVDNKFVRMQSVVREVARAIASKDPHPFVVREDVGLEEWSETDESKRCAFISLHCKAVHDLPQELVWPELQFFLLQNNNPLLNIPNTFFEGMKKLKVLDLSRMHFTTLPSSLDSLANLRTLRLDGCKLGDIALIGKLTKLEVLSLMGSTIQQLPNEMSRLTNLRLLDLNDCEKLEVIPRNILSSLSQLECLYMKSSFTQWATEGESNACLSELNHLSHLTTLETYIRDAKLLPKDILFENLTRYGIFIGTQGWLRTKRALKLWKVNRSLHLGDGMSKLLERSEELEFSQLSGTKYVLHPSDRESFLELKHLKVGYSPEIQYIMDSKNQQLLQHGAFPLLESLILQTLKNFEEVWHGPIPIGSFGNLKTLEVNLCPKLKFLLLLSTARGLSQLEEMIISYCDAMQQIIAYERESKIKEDGHAGTNLQLFTKLRSLKLEGLPQLINFSSELETTSSTSLSTNARSEDSFFSHKHPSRITLQQISYFATIILGTNNFMEKKVDFYNKFYFNVKKDFC* 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0469 1558 SUPERFAMILY L domain-like 1088 1489 - -
Vvi14g0469 1558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 974 IPR027417 -
Vvi14g0469 1558 Pfam NB-ARC domain 721 959 IPR002182 GO:0043531
Vvi14g0469 1558 Gene3D Ribonuclease Inhibitor 1085 1538 IPR032675 -
Vvi14g0469 1558 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 458 607 - -
Vvi14g0469 1558 Gene3D Ribonuclease Inhibitor 466 707 IPR032675 -
Vvi14g0469 1558 Coils Coil 1000 1020 - -
Vvi14g0469 1558 Gene3D Ribonuclease Inhibitor 85 464 IPR032675 -
Vvi14g0469 1558 SMART LRR_typ_2 1181 1203 IPR003591 -
Vvi14g0469 1558 SMART LRR_typ_2 1136 1159 IPR003591 -
Vvi14g0469 1558 SMART LRR_typ_2 1204 1228 IPR003591 -
Vvi14g0469 1558 SMART LRR_typ_2 184 207 IPR003591 -
Vvi14g0469 1558 SMART LRR_typ_2 139 162 IPR003591 -
Vvi14g0469 1558 SUPERFAMILY L domain-like 60 693 - -
Vvi14g0469 1558 Gene3D - 708 866 IPR027417 -
Vvi14g0469 1558 Gene3D - 873 962 IPR042197 -
Vvi14g0469 1558 PRINTS Disease resistance protein signature 812 826 - -
Vvi14g0469 1558 PRINTS Disease resistance protein signature 907 921 - -
Vvi14g0469 1558 PRINTS Disease resistance protein signature 1202 1218 - -
Vvi14g0469 1558 PRINTS Disease resistance protein signature 737 752 - -
Vvi14g0469 1558 Pfam Leucine rich repeat 1113 1172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0469 Vvi-Chr14 5293868 5311280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0469 734 1198 WRKY Transcription Factor Family AT5G45050 22.433 1.46e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0469 - - vvi:100248775 1759.58