Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0461 ATGGACACAACCAAATATGAGAAAACCCTAAAAGCTTGCGCCTTAGATAAGGATATAAACAGTTTTGACCATGGTGATGAAATAGAAATCGGTCAGAGAGGGCTTAATATGAGTGGAGGACAGAAGCAGAGAATTCAACTTGCGCGAGCTGTCTATAATGATGTCGATATCTACTTCCTGGATGACCCTTTTAGTGCAGTAGATGCACATACCGCTGCAATTCTTTTCAATGAATGCGTCATGGCTGCTCTTGCTCATAAAACTGTCATTCTAGTGACTCATCAAGTGGAAGTCAATAAAATTCTGGTTATGGAAGCTGGACAGATAACTCAATCAGGAAGCTATGAGGACCTCTTGACACCCGGGACAGCATTTGAGCAGCTTGTAAATGCACATAAGAATGAAGTAACAGTATTGGAATTTTCAAATGATGAACAAGTAGAACGTCAAAAAAAATTGGGTCAGAATCTGCTAAAGAAGTCTCATGGACCCCTCTCCACCAAAGAAAACAGTGAAGGGGGGATTTCTATGAAGGGTCTGCCTGGGGTTCAGCTCACTGAAGAAGAAGAGACAGAGATTGGTGATGTTAGCATGTCAATTAAATCTGAGTTTACAGAAGTGAAGATGGAAGTTCTTGTGAACTCTGGGCAGGGAAGTTCAAAGATTAGTGAACTAAAGAAGGATAATTTGGATGATATCTGTGACCGAAGGCCTGATAATGAACCAATTACATATGGTGAGTCTGCTGGTTTTGCTAAGGAAGAAAATGTTAAACTTGAAAAGGAGAAGTGA 792 0.4053 MDTTKYEKTLKACALDKDINSFDHGDEIEIGQRGLNMSGGQKQRIQLARAVYNDVDIYFLDDPFSAVDAHTAAILFNECVMAALAHKTVILVTHQVEVNKILVMEAGQITQSGSYEDLLTPGTAFEQLVNAHKNEVTVLEFSNDEQVERQKKLGQNLLKKSHGPLSTKENSEGGISMKGLPGVQLTEEEETEIGDVSMSIKSEFTEVKMEVLVNSGQGSSKISELKKDNLDDICDRRPDNEPITYGESAGFAKEENVKLEKEK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0461 263 Pfam ABC transporter 29 64 IPR003439 GO:0005524
Vvi14g0461 263 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 203 - -
Vvi14g0461 263 MobiDBLite consensus disorder prediction 160 179 - -
Vvi14g0461 263 FunFam Uncharacterized protein 1 159 - -
Vvi14g0461 263 Gene3D - 1 156 IPR027417 -
Vvi14g0461 263 MobiDBLite consensus disorder prediction 233 263 - -
Vvi14g0461 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 131 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0461 Vvi-Chr14 5191196 5191987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0461 25 122 Calmodulin-binding Proteins AT2G36910 30.392 4.68e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0461 - - vvi:100246410 340.502