Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0455 ATGTTCAAGAATTTTCACAATCTCAAAGAGTTACGTATCATTGATTGTGGGAAGGAAGACATAAGAGGTGTCAATACTTCTATTAATGATGAAGTGCTCTTCAATGAAAAGGCTTCATTCCTAGAATCAAGACCCTCCACTCTGAACGATATTATGGATGCCTTAAGAGACGACAATATCAACTTGATTGGAGTATGGGGCATGGCCGGTGTGGGCAAAACAACACTGCTGAAACAAGTGGCTCAACAAGCTAAGCAACAGTGGTTGTTCACCAAACAAGCCTATATGGATGTATCCTGGACTCGAGACTCGGATAAACGTCAAGAAGGAATTGCGGAACTTCAACAAGAAATTGAGAACGCGTTGGAGTTGTCACTTTGGGAGGAGGATGAATCTAAAAAAGCGGATGAACTGAAGCAGGAACTGATGAAAGAAGGGAAGATCCTTATTATCTTAGATGATATTTGGACGGAAATTGATTTGGAGAAAGTAGGAATTCCTTGTAAAGGTGATGAGACACAATGCAAAATAGTGTTGGCTTCGAGAGATGGAGACCTATTATGCAAAGACATGGGCGCACAAAGATGTTTTCCAGTGGAACATTTACCACCAGAAGAATCTTGGAGTCTTTTTAAGAAGACAGTAGGTGATTCCGTGGAGGAGAATCTTGAACTGCGACCCATAGCCATTCAAGTAGTTAAAGAATGTGAGGGTCTACCAATTGCAATTGTAACAATTGCCAAGGCATTAAAAGATGAGACCGTGGCTGTATGGAAGAATGCCTTGGAACAACTTAGGAGTTGTGCACCAACAAACATTAGAGCAGTGGATAAGAAAGTTTACTCATGTCTGGAGTGGAGCTACACCCATTTGAAGGGTGATGACGTTAAGTCATTGTTCTTACTTTGTGGGATGCTGGGCTATGGTGATATTTCATTAGATCTCTTGTTACGATATGGTATGGGTCTGGATTTGTTTGACCGCATCGACTCATTGGAGCAAGCAAGAAATAGACTACTTGCATTGGTGGAAATCCTCAAAGCCTCAGGCTTGTTACTTGACAGTCATGAAGATACACACATGTTTGATGAAGAAATAGATTCAAGTTTGCTTTTCATGGATGCTGATAACAAGTTTGTGAGGATGCACAGTGTTGTTCGTGAAGTTGCCAGAGCAATTGCATCCAAGGATCCTCATCCATTTGTAGTCAGAGAAGATGTTGGATTGGAAGAATGGTCAGAGACTGATGAATCCAAAAGGTGTGCTTTCATCTCTTTGCATTGCAAAGCTGTGCATGACCTTCCTCAAGAGTTGGTATGGCCGGAACTTCAATTTTTTCTATTGCAGAACAACAATCCTCTCTTGAATATCCCGAACACATTTTTCGAAGGGATGAAAAAACTCAAAGTTTTGGATTTGTCCCGTATGCATTTTACAACACTACCATCATCACTTGATTCCCTTGCAAATCTCCGAACATTGCGTCTGGATAGGTGCGAGTTGGGAGACATTGCTCTAATTGGAAAGCTAACGAAACTAGAAGTTCTTAGCTTGAAGTGTTCTACAATCCAACAATTGCCTAATGAAATGTCGCGATTGACCAATCTAAGACTCTTGGATTTGAATCATTGCCAGAAGCTTGAAGTAATTCCACGAAATATCTTATCAAGTTTGTCTCGATTAGAATGTTTGTACATGAAATCTAGGTTTACTCAATGGGCAACTGAAGGTGAAAGCAATGCTTGCTTATCCGAGCTAAATCATTTGTCTCATTTGACAACTTTAGAGATATATATACCAGATGCCAAGTTGCTACCAAAAGACATTCTATTTGAGAAATTGACAAGATATAGGATATTTATAGGTACTCGGGGGTGGTTGAGAACCAAAAGAGCATTGAAGCTTTGGAAAGTCAATAGAAGCTTACATTTGGGGGATGGAATGAGCAAGTTGTTGGAGAGAAGTGAAGAACTAGGGTTCAGTCAATTAAGTGGTACTAAATATGTTCTTCACCCATCAGATAGGGAGAGTTTCCTTGAACTAAAGCATCTCGAAGTTGGTGATAGTCCTGAGATTCAATACATCATGGATTCAAAGAATCAACAGTTGTTGCAACATGGTGCCTTTCCTCTATTGAAGTCATTGATTCTTCAGAATTTGAAAAACTTCGAAGAAGTATGGCATGGCCCAATTCCAATAGGGTCTTTTGGTAACTTAAAAACTCTAAAAGTGCGTTTTTGTCCTAAATTGAAATTTCTCCTTTTGCTCTCCACGGCTAGAGGCCTTTCCCAACTTGAAGAAATGACGATAGAATACTGCGATGCCATGCAACAAATAATCGCATATGAAAGGGAGTCAGAAATAAAAGAAGATGGACATGCTGGGACCAACTTGCAACTATTCCCAAAATTGCGAACCTTGATTCTCCATGATCTACCACAGCTCATCAACTTCAGTTCCGAGTTAGAAACAACATCTTCCACATCTTTGAGTACAAATGCAAGGTCGGAAAACTCATTTTTCAGTCATAAGGTTTCATTCCCTAAGACAGAGAAGTTGATGCTCTATAATGTGCCCAAGTTGAATCTTTCTTCAATCTACAGATCTTAA 2610 0.3989 MFKNFHNLKELRIIDCGKEDIRGVNTSINDEVLFNEKASFLESRPSTLNDIMDALRDDNINLIGVWGMAGVGKTTLLKQVAQQAKQQWLFTKQAYMDVSWTRDSDKRQEGIAELQQEIENALELSLWEEDESKKADELKQELMKEGKILIILDDIWTEIDLEKVGIPCKGDETQCKIVLASRDGDLLCKDMGAQRCFPVEHLPPEESWSLFKKTVGDSVEENLELRPIAIQVVKECEGLPIAIVTIAKALKDETVAVWKNALEQLRSCAPTNIRAVDKKVYSCLEWSYTHLKGDDVKSLFLLCGMLGYGDISLDLLLRYGMGLDLFDRIDSLEQARNRLLALVEILKASGLLLDSHEDTHMFDEEIDSSLLFMDADNKFVRMHSVVREVARAIASKDPHPFVVREDVGLEEWSETDESKRCAFISLHCKAVHDLPQELVWPELQFFLLQNNNPLLNIPNTFFEGMKKLKVLDLSRMHFTTLPSSLDSLANLRTLRLDRCELGDIALIGKLTKLEVLSLKCSTIQQLPNEMSRLTNLRLLDLNHCQKLEVIPRNILSSLSRLECLYMKSRFTQWATEGESNACLSELNHLSHLTTLEIYIPDAKLLPKDILFEKLTRYRIFIGTRGWLRTKRALKLWKVNRSLHLGDGMSKLLERSEELGFSQLSGTKYVLHPSDRESFLELKHLEVGDSPEIQYIMDSKNQQLLQHGAFPLLKSLILQNLKNFEEVWHGPIPIGSFGNLKTLKVRFCPKLKFLLLLSTARGLSQLEEMTIEYCDAMQQIIAYERESEIKEDGHAGTNLQLFPKLRTLILHDLPQLINFSSELETTSSTSLSTNARSENSFFSHKVSFPKTEKLMLYNVPKLNLSSIYRS* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0455 869 SUPERFAMILY L domain-like 381 819 - -
Vvi14g0455 869 SMART AAA_5 59 197 IPR003593 GO:0016887
Vvi14g0455 869 Pfam NB-ARC domain 47 288 IPR002182 GO:0043531
Vvi14g0455 869 Coils Coil 104 131 - -
Vvi14g0455 869 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 27 862 - -
Vvi14g0455 869 PRINTS Disease resistance protein signature 236 250 - -
Vvi14g0455 869 PRINTS Disease resistance protein signature 531 547 - -
Vvi14g0455 869 PRINTS Disease resistance protein signature 62 77 - -
Vvi14g0455 869 PRINTS Disease resistance protein signature 142 156 - -
Vvi14g0455 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 303 IPR027417 -
Vvi14g0455 869 Gene3D Ribonuclease Inhibitor 414 867 IPR032675 -
Vvi14g0455 869 Gene3D - 202 291 IPR042197 -
Vvi14g0455 869 Coils Coil 329 349 - -
Vvi14g0455 869 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Vvi14g0455 869 Gene3D - 24 196 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0455 Vvi-Chr14 5084147 5089173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0455 59 551 WRKY Transcription Factor Family AT5G45050 21.043 3.50e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0455 - - vvi:104881433 1689.47