Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0443 ATGGCTTCCCAGTTTGGTTCAATGTTGACAAGGTTGGGTAATCTATCCACTTCTGATCATGCTTCTGTGGTGTCCATCAATCTATTTGTGGCACTCCTTTGTGGTTGCATTGTGATTGGTCATCTTCTTGAGGAGAACCGGTGGGTGAATGAGTCAATCACTGCCCTTGTGATTGGTGTGTGTACTGGAGTTGTTATTTTGCTGACAAGTGGGGGAAGAAGCTCACATCTTCTGGTCTTCAGTGAAGATCTTTTCTTTATATATCTTCTTCCGCCCATTATATTTAATGCTGGGTTTCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTTATCACTATCATGCTGTTTGGTGCGGTTGGAACACTAATATCTTGTGGCATAATAACATCAGGTGTTATGCAATTCTTTAGTAAATTGGATATTGGTTCCTTCGATATAGGAGATTATCTAGCCATTGGTGCGATATTTTCAGCAACAGATTCTGTTTGCACGTTGCAGGTGCTTAACCAGGATGAGACGCCTTTACTTTATAGCCTGGTCTTTGGGGAGGGGGTTGTAAATGATGCAGCATCAGTTGTTCTTTTCAATGCAATCCAGAGCTTTGATCTCACCCACACCAATCTCAGGATTGCTTTGCAGTTTATTGGCAACTTTTTTTATTTATTTTTTACAAGCACTATGCTAGGAGTCGTAGCTGGGTTGCTCAGTGCTTACATTATCAAAACTTTGTATTTTGGCAGGCACTCTACTGATCGGGAGGTTGCCCTTATGATGCTTATGGCATACCTTTCCTACATACTTGCTGAACTATTCTATTTGAGTGGCATTCTCACGGTATTTTTCTGTGGGATTGTAATGTCCCATTACACGTGGCACAATGTTACAGAGAGTTCAAGAGTCACTACCAAGCATGCTTTTGCGACCTTGTCATTTGTAGCTGAGATTTTCATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAGAAATGGAGATTTGTGAGCAAAACTCCTGGAACATCAGTTGCTGTGAGTTCGATACTGATAGGTTTGGTTCTGGTTGGAAGAGCAGCTTTTGTTTTTCCCCTATCCTTTTTATCCAACTTAGCCAAGAAGAACCCAACTGAAAAAATCACTTTCAGGCAGCAAGTTATAATATGGTGGGCTGGTCTCATGAGGGGTGCTGTGTCTGTGGCCCTTGCTTATAATCAGTTTGCAAGGTCGGGACATACTCAATTGCGATCAAATGCAATCATGATTACCAGCACCATAACAGTTGTTCTTTTCAGCACAGTGGTATTTGGTTTAATGACTCAACCTCTTATAAGATTCTTGCTTCCTCATTCAAAAAACACAACCAGCATGGTATATTCAGACTCATCAACTCCAAAATCGTTTGCGGTGCCACTTCTTGAGAGCGCACAGAACTCTGATGCTGATATGGGTGGCCATGGTTTCCCACGCCCTAGTAGCCTTCGCATGCTCCTGACAACCCCGTCTCGCAGTGTTCATCACTACTGGCGCAAGTTTGATGATGCCATTATGCGTCCAATGTTTGGTGGGCGGGGTTTTGTCCCATTCGTTCCTGGCTCACCAACTGAAAGGTCTGCCCCTCAGTAA 1620 0.4284 MASQFGSMLTRLGNLSTSDHASVVSINLFVALLCGCIVIGHLLEENRWVNESITALVIGVCTGVVILLTSGGRSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFITIMLFGAVGTLISCGIITSGVMQFFSKLDIGSFDIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDAASVVLFNAIQSFDLTHTNLRIALQFIGNFFYLFFTSTMLGVVAGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYILAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSKTPGTSVAVSSILIGLVLVGRAAFVFPLSFLSNLAKKNPTEKITFRQQVIIWWAGLMRGAVSVALAYNQFARSGHTQLRSNAIMITSTITVVLFSTVVFGLMTQPLIRFLLPHSKNTTSMVYSDSSTPKSFAVPLLESAQNSDADMGGHGFPRPSSLRMLLTTPSRSVHHYWRKFDDAIMRPMFGGRGFVPFVPGSPTERSAPQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0443 539 PANTHER SODIUM/HYDROGEN EXCHANGER 16 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vvi14g0443 539 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi14g0443 539 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi14g0443 539 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi14g0443 539 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vvi14g0443 539 Gene3D - 146 197 - -
Vvi14g0443 539 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi14g0443 539 NCBIfam sodium/hydrogen exchanger 3 25 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0443 Vvi-Chr14 4886251 4918307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0443 3 537 Antiporters AT3G05030 78.108 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0443 - - vvi:100259022 1053.89