Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0436 ATGGACTGCAACAAGGAAGAGGCCTTGAGGGCCAAAGTAATTTCAGAAAAGAAGATGCAAAGTGGTGACTTCATAGGAGCCCGGAGGATAGCACAAAGGGCTCAACAACTTTTCCCTGATCTTGAGAACATTTCCCAGCTGCTAACTGTATGTGATGTTCACTGTTCTGCCCAAAACAAGATATATGGGACTGAAATGGACTGGTATGGAATCCTTAAAGTTGAACAAGCAGCTGATGATGCTATCATCAAGAAGCAATACCGAAAGCTTGCCCTTCTACTTCATCCAGATAAGAATAAGTTTGCTGGTGCTGAAGCTGCTTTTAAGCTTATTGGAGAAGCAAATAGAATACTTTCAGACCAGGGGAAGCGGTCTGCGTATGATATGAAGTATCGAGTGTCACTGAAGCATACTGCTCCAAAGCCACCACCTCATCAGCTGAATAGGAACTCATTTGTCAGAAAACAATATGGGGTTCAGAACAATTTTCCAAATGTTGCCAATCCTCATGGTGTGGGTTTGAACCCTCATCAGCAGACACAACCAGGTTTATCTGATGGCCAGCAAACATTCTGGACATGTTGCCCTTTTTGTAGTATAAGGTACCAATATTACAGGGATATTATGAACAGAGTTTTGCGTTGTCAAACTTGCCAGAAATCCTTCATTGCCTATGATTTAGGGGCTCAGAGTGTGCCACCAGGAGCAACTTGGAGTCAGCCTGCATTCTCACTTCATAATGAAGTCCCAAATCAGTGCCCCATTAAAGTGAAGACACAAAGTCCTGCAATGAACCCTGGCAGCATGGGATCTCAGGGAAGTTTTAACAGTAAAACTGCTGGGCCAGATTTAGTAAAGAAGAAAAGGTGCGCTGATGAAGCCATTGGGGGGTCTAAAACCAATGGGAAAGAAGATGGCAATGTAGATGTGGGAAGTAAGAAAGGTGTTAGAATGCCCAAGTCCGATGCAGATAAACCCAGGAAATCAGGATCTTCAAGAAGAAACACAAGCAGGAAAAGGAAAAATTTACCTGTGGAATCCAGTGAAAGTTGCCAAACTTCAAGTAGTGAAGATGCCAAAGAAGCTGCCATTGCTCAAGAAAAAGGTGTCGTTCCTTCTGGAGAAAATTCTGAATTTAATATAGGACATCAACCAAGGAGATCTTCGCGGAAAAAGCAGCATGTTTATTATAATGAAAGTGTTAGTGATGATGATGACTTTGTAAGCCCTCCGAAAAAGGCAAGAATGGATGGATCACTGGGCACTGGTGAGGAGAGGAAAGATAAACCTTTGGATGATGGGGTACCAAAAACTTGTAATACTGCTGGTTTTACTTCTGTTGTGGATGTAGGCAAGGAAAATATCAAACAAAAAGAAAATGTCCCTCTTGAAGAAACTGTTGTGAAAAGAAAAAGTGAAGCTGGGGGATGTATGATCAATGGAAAAGCAGCAGCCACGGCAGATGACAATGATGAAAGGTGCAAAGGCAGTGTTAATTCTGAACCAAACTCATGCCCTGATGTTACCCACGAGCCAGTGAGCCTTGAATGTCTTGACTGTGATTTTAGTGATTTTGATAAAGATAAGAGAGAAGATTGTTTTTCTGTTGATCAGATATGGGCTATTTATGACCCAATAGATGGCATGCCAAGATTCTATGCTCGGATCAGGAAAGTTTTCGCTCCTGAATTTAAGCTGCGTTTCACTTGGCTAGAGCCCTCTCCAGATGATGCAAGCGAGATTGCTTGGGTCAAAAATGAATTGCCTTATGCCTGTGGTAAATTTACATATGGGCAAACAGAAGAAACTGCAGACCTCCCTATGTTCTCTCATCAGGTTCATGGTGAGAAAGGTGGTATTAGGAATTCCTATTTTGTATATCCTAGGAAGGGAGAAACTTGGGCCATCTACAAAAACTGGAATACTGATTGGAGCTCCAACCCTGAAATCCATAGGAAATATGAATTTGAATATGTGGAGATTCTGTCAGATTTTGTTCCGGATGCTGGAATTGGGGTTGCTTACTTAGGCAAAGTGAAAGGGTTTGTTAGCCTCTTTCGGCAAAGTGTGCAGCATGGGATTGTGTTATTTCAAATACCACCTAGTGAACTGTTAAGATTTTCACATCGAATTCCCTCATTTAGAATGACTGGCTCAGAAGGGGAAGGTGTCCCTAAAGGATCATTTGAACTTGATCCTGCTGCTCTGCCTAACAACCTGAATGATTTTAGTGGTAATGATGATCTGAAGACGGAAAAGGAAAGTGTCAATGCTGGTGTCAATGGTTCGCGTACTAAATCTCCTGAAAATGAAATGAAATCCATGAACAATCCCACGATGATCAAGCCAATGAAGCACGAGGAGAATGATACTGAAAGAGAGACCTCAGAACTTAGAAGGTCTCCAAGGGAATTAAACGGCTTATATAAGAAAGATGGTCAAGTAAATCAAAGTGAATGTGCAAACCAAGCGGAAATTGGAGATAAAAACCATGGAGACCTCACTCAGTCTAAAGGGAGCATTTATGTAAATCTGGCTGATGAGAGGATCAATACCCCTAAGAAGCATGAAAAGGATGATCTTGAAACAGGTAACTTCAAACTTAGAAGATCTCCAAGGGCACTAAACAAGAAACACAGTCAAGTAAATGCAAGTCAATTTATGGTTGAAGAGCAGACTGACAGGCATATAGTTCATGTCAAAGATGATCATCATGGCAGCGCTCATCCTAAAGGAAGCATTTCATCATGTCAGTATGATGAGAAGATTCCGTTGCATGTGAAGGGCCAAAGTTCCAACAGTTTCACAAAAAATGCCATTGTCTCTGCATCTATCTCTTCAAATAAAATTCTGGAAGCACAGTTTTATGACTTCAGTGGGGAAAAATCTGAGGAGAAGTTTCAGACTGGTCAGCTATGGGCACTGTATAGTGAAGTAGATAGGATGCCTAAGAACTATGCTCAAGTTAAGAAGATCGAGCCTACTCCTTCTTTCAGGTTGCATGTGGTATTTCTTGAAGCCTGCTCGCCTCCCAAAGACATGGTTCAGCCTGTTTGTTGTGGGACATTCAAACTCAAAAATGGGAAAACCAAGGTTTTTCCACGTGCAGACTTTTCTCATCAGATAAGAGCAGAATCCATTGGGAAGAACAAATTTGCTATCTTACCTATTAAGGGTCAGGTCTGGGCATTATATAAAAACTGGGAAAATAATTTGATGTGCTCTGACATAGTGAATTGCAAGTATGACATAGTTGAAGTTCTCGAAGATAATGACCACAGCACAAAAGTTTCAGTTTTACTACCCCTAAATGGTTTTAAATCTGTTTATAAGGCTCCAAGAAGGCAAAGATCAAGTACTGGTATTTTGGATATACCCCGGGACGAGTTACCAAGATTCTCTCATCAGATTCCTGCTGTTCGACACACAGGGGAGAACGATGCCCGCCTGGCAGACTGTTGGGAGCTAGACCCTGCTTCAGTCCCTGGTATTTTAGTTTGTTTAGATTGA 3510 0.4165 MDCNKEEALRAKVISEKKMQSGDFIGARRIAQRAQQLFPDLENISQLLTVCDVHCSAQNKIYGTEMDWYGILKVEQAADDAIIKKQYRKLALLLHPDKNKFAGAEAAFKLIGEANRILSDQGKRSAYDMKYRVSLKHTAPKPPPHQLNRNSFVRKQYGVQNNFPNVANPHGVGLNPHQQTQPGLSDGQQTFWTCCPFCSIRYQYYRDIMNRVLRCQTCQKSFIAYDLGAQSVPPGATWSQPAFSLHNEVPNQCPIKVKTQSPAMNPGSMGSQGSFNSKTAGPDLVKKKRCADEAIGGSKTNGKEDGNVDVGSKKGVRMPKSDADKPRKSGSSRRNTSRKRKNLPVESSESCQTSSSEDAKEAAIAQEKGVVPSGENSEFNIGHQPRRSSRKKQHVYYNESVSDDDDFVSPPKKARMDGSLGTGEERKDKPLDDGVPKTCNTAGFTSVVDVGKENIKQKENVPLEETVVKRKSEAGGCMINGKAAATADDNDERCKGSVNSEPNSCPDVTHEPVSLECLDCDFSDFDKDKREDCFSVDQIWAIYDPIDGMPRFYARIRKVFAPEFKLRFTWLEPSPDDASEIAWVKNELPYACGKFTYGQTEETADLPMFSHQVHGEKGGIRNSYFVYPRKGETWAIYKNWNTDWSSNPEIHRKYEFEYVEILSDFVPDAGIGVAYLGKVKGFVSLFRQSVQHGIVLFQIPPSELLRFSHRIPSFRMTGSEGEGVPKGSFELDPAALPNNLNDFSGNDDLKTEKESVNAGVNGSRTKSPENEMKSMNNPTMIKPMKHEENDTERETSELRRSPRELNGLYKKDGQVNQSECANQAEIGDKNHGDLTQSKGSIYVNLADERINTPKKHEKDDLETGNFKLRRSPRALNKKHSQVNASQFMVEEQTDRHIVHVKDDHHGSAHPKGSISSCQYDEKIPLHVKGQSSNSFTKNAIVSASISSNKILEAQFYDFSGEKSEEKFQTGQLWALYSEVDRMPKNYAQVKKIEPTPSFRLHVVFLEACSPPKDMVQPVCCGTFKLKNGKTKVFPRADFSHQIRAESIGKNKFAILPIKGQVWALYKNWENNLMCSDIVNCKYDIVEVLEDNDHSTKVSVLLPLNGFKSVYKAPRRQRSSTGILDIPRDELPRFSHQIPAVRHTGENDARLADCWELDPASVPGILVCLD* 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0436 1169 Pfam DnaJ domain 67 128 IPR001623 -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 718 816 - -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 257 438 - -
Vvi14g0436 1169 SUPERFAMILY Chaperone J-domain 59 133 IPR036869 -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 783 807 - -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 306 331 - -
Vvi14g0436 1169 Pfam Domain of unknown function (DUF3444) 949 1145 IPR024593 -
Vvi14g0436 1169 Pfam Domain of unknown function (DUF3444) 514 720 IPR024593 -
Vvi14g0436 1169 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1162 - -
Vvi14g0436 1169 SMART dnaj_3 66 123 IPR001623 -
Vvi14g0436 1169 CDD DnaJ 67 120 IPR001623 -
Vvi14g0436 1169 Gene3D DnaJ domain 53 143 IPR036869 -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 257 279 - -
Vvi14g0436 1169 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vvi14g0436 1169 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vvi14g0436 1169 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 392 434 - -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 756 777 - -
Vvi14g0436 1169 MobiDBLite consensus disorder prediction 346 360 - -
Vvi14g0436 1169 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0436 Vvi-Chr14 4739890 4743399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0436 4 234 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.911 1.30e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0436 - - vvi:100255461 2388.99