Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0413 ATGGCAGACATCGTTATTACCATTGCTGCAAAAGTTGCAGAGTACTTGGTTGCTCCAATTGGACGCCAGCTTAGATATCTGTTTTGCTACCGGAGCTATACGGATGATCTCAACAAGAAGGTTCAGGAGTTGGGGCTTAGCGCGCTTGAAACGCGCCTAAACCGTCGCCCTAAACCGCACCTGCAACGGCGCTGCCTGATCCGCGCCTCAATGGCGCCTGAAGGCCCTAGAATGGTGCGCCTGCAATGGCGCCTGCATTGTGCCTCCAAGGAGGGGCGTGTGAGGGATGACCTTCAGAGAACTGTTGGTGACGAAACGAAACGAGTGGGGTATGAAATCAGACCTATTGTTCAAGAGTGGCTGAATCGGGTAGATGGGATTACAGAGGAGGCAGAGGAATTGATGAAAGATGAAAACAAGAGCTGTTTCAATGGGTGGTGTCCTAATCTCAAGTCACGGTACCTGCTAAGCAGGAAAGCAGACAAGAAGGCGCAGGTTATTGTTCAAATCCAAAAAGAAGGCAATTTCCCTCACGGAGTATCAGATCGTGTCCCTTTACGGAACTTAACCTTTAAAAATTATGAACCTTTTGAATCGAGAGCATCGATTTTGAACAAAATAATGGATATATTCGGAGATGATGAGATCAAGATGATTGGAGTATGGGGGATGGGCGGCGTGGGCAAAACCACACTGGTTAAACAAGTAGCCGAACAAGCTAAGCAAGGGAAGCTGTTCACAACAGAAGTCTACATAGATGTATCCTGGACTCGAGACCTGGAAAAACCTCAACAAGGAATTGCTAAAATTCAACAAAAAATTGCAGAGATGTTACATTTGGAGTTTACGGGGAAGGATGAATCCACAAGAGCAGTTGAACTGAAGCACAGACTGAAGAAGGAGAAGATCCTAATTATATTAGATGATATTTGGAAGGAGATTGATCTGGAGGAAGTTGGAATTCCTTGTAAAGATGATCCGACAGAATGCAAAGTAGTGTTGACGTCTAGAGATCTACACCTAATAAGACAATACATGGACGCAGAAACATGTTTCCTAATTCAACAATTGCCTCGGAAAGAAGCTTGGAGTTTATTTAACAAGACATCAGGTGGTTCCTTGGAGAAGAATCTTGAGCTGCGACCTATAGCCACCGATGTAGTTGAAGAATGCGAGGGTCTACCAATTGCAATTGTAACAATTGCAAAGGCATTAAAAGGTAAGAACGTGGCTGTATGGAAGAATGCCTTGAAAGAACTGAGAACATCTGCACCAACAAACATCCAAGGAGTGGAGGAAAAGGTATACTCATGTCTGGAGCTGAGCTACAACCATTTGGAAAGTGATGAAGTCAAGTCATTGTTCTTACTCTGTGGTTTGCTGGGCGATGGCGATATTTCATTGGATGACTTGTTAAAATATGGCATGGATTTGGATTTGTTTGATTACATCGATGCATTGGAGCAAGCAAGAAATAAACTACTTACCCTGGTGGAAATCCTTAAAGCCTCGAGCCTGTTGCTTGAAGTTGAAGATGGAAGCTATCGTGAAGCTCCAAGTTTGGTTTTTGTGGAGGAAGGTAACGGGTTTGTCAGAATGCATGACGTGGTTCGTGATGTTGCCAAAGCAATTGCATCGAAAGATCCTCATCATCGATTTGTGGTGAAAGAAGATGTTAGATTACAAGAATGGGAAAAGAGGGATGGTGAATTGAGAAATTGTACTGGCATATCTTTGAAATGCACACATGTCCATGAGCTTCCAGAAGGGTTGGTATGTCCCAAACTTGGATTCTTTTTGTTGAATGGTAATGATAATTTCTTGAAAATTCCAGACACCTTTTTCAAAGAAATGAAAGAAGTCAGAGTTTTAAGCTTGTTTCGAATTGATCTTACACAACTGCCTTCATCACTTCACTTTCTTTCAAATCTTCGAACATTGTGCCTACACCGATGTAGGACGTTGAAAGACATAACAATACTTGGAGAACTGAAGAAACTACAAATTCTTAGCCTTGTAGACTGGGATTCTAGTGTTTCCCAAAGAAATGATGCAATTGACTGA 2064 0.4273 MADIVITIAAKVAEYLVAPIGRQLRYLFCYRSYTDDLNKKVQELGLSALETRLNRRPKPHLQRRCLIRASMAPEGPRMVRLQWRLHCASKEGRVRDDLQRTVGDETKRVGYEIRPIVQEWLNRVDGITEEAEELMKDENKSCFNGWCPNLKSRYLLSRKADKKAQVIVQIQKEGNFPHGVSDRVPLRNLTFKNYEPFESRASILNKIMDIFGDDEIKMIGVWGMGGVGKTTLVKQVAEQAKQGKLFTTEVYIDVSWTRDLEKPQQGIAKIQQKIAEMLHLEFTGKDESTRAVELKHRLKKEKILIILDDIWKEIDLEEVGIPCKDDPTECKVVLTSRDLHLIRQYMDAETCFLIQQLPRKEAWSLFNKTSGGSLEKNLELRPIATDVVEECEGLPIAIVTIAKALKGKNVAVWKNALKELRTSAPTNIQGVEEKVYSCLELSYNHLESDEVKSLFLLCGLLGDGDISLDDLLKYGMDLDLFDYIDALEQARNKLLTLVEILKASSLLLEVEDGSYREAPSLVFVEEGNGFVRMHDVVRDVAKAIASKDPHHRFVVKEDVRLQEWEKRDGELRNCTGISLKCTHVHELPEGLVCPKLGFFLLNGNDNFLKIPDTFFKEMKEVRVLSLFRIDLTQLPSSLHFLSNLRTLCLHRCRTLKDITILGELKKLQILSLVDWDSSVSQRNDAID* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0413 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 458 IPR027417 -
Vvi14g0413 687 Coils Coil 117 137 - -
Vvi14g0413 687 PRINTS Disease resistance protein signature 391 405 - -
Vvi14g0413 687 PRINTS Disease resistance protein signature 297 311 - -
Vvi14g0413 687 PRINTS Disease resistance protein signature 218 233 - -
Vvi14g0413 687 PRINTS Disease resistance protein signature 639 655 - -
Vvi14g0413 687 Gene3D - 357 446 IPR042197 -
Vvi14g0413 687 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 90 675 - -
Vvi14g0413 687 SMART AAA_5 215 352 IPR003593 GO:0016887
Vvi14g0413 687 FunFam Probable disease resistance protein At1g61300 194 349 - -
Vvi14g0413 687 SUPERFAMILY L domain-like 532 673 - -
Vvi14g0413 687 Coils Coil 484 504 - -
Vvi14g0413 687 Gene3D Ribonuclease Inhibitor 548 682 IPR032675 -
Vvi14g0413 687 Gene3D - 182 352 IPR027417 -
Vvi14g0413 687 Pfam NB-ARC domain 206 444 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0413 Vvi-Chr14 4383280 4390891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0413 215 548 WRKY Transcription Factor Family AT5G45050 21.791 1.38e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0413 - - vvi:104881443 1139.41