Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0407 ATGGCCGGGAGTAATGAAGTCAACCTCAGTGAGTCCAAGAGGGTGGTTCCACTAAATACATGGATTCTAATATCCAATTTCAAGCTGGCTTACAATCTTCTGCGCCGTCCTGATGGCACCTTCAATCGCCACTTGGCTGAGTTCCTTGACAGGAAAGTCCCTGCCAATGCAAACCCAGTTGAGGGGGTGTTCTCTTTTGATGTCATCATCGACCGGAGCACAAGTCTCCTTAGCCGAATCTATCGACCGGCCACAGGAGAAGAAGCTCTCCCCAGCATCATGGAGCTTGAAAAGCCGGTGACGGGTGATATTGTTCCTGTCATACTTTTCTTCCACGGTGGGAGCTTTGCACATTCCTCTGCTAATAGTGCAATATATGACACACTTTGCCGGCGCCTTGTTGGCATATGCAAGGCTGTTGTTGTGTCTGTGAATTATCGGCGAGCACCTGAAAACCCATACCCTTGTGCCTATGATGATGGCTGGGCTGCTCTTAAGTGGGTTAACTCGAGGCCATGGCTTAAAAGTGAGGAGGACTCAAAAGTTCATATATACATGGTTGGGGATAGCTCTGGGGGCAACATTGTTCACAATGTTGCTTTGAAGGCAGTAGAATCCGGAATTGAAGTATTGGGAAATATACTACTGAACCCAATGTTTGGTGGACAAGAGAGAACTGAATCAGAAAAGCGTTTAGATGGAAAATATTTTGTCACTATCCAAGACCGGGACTGGTACTGGAGAGCTTTTCTCCCTGAAGGGGAAGATAGGGACCATGCGGCCTGTAACCCTTTTGGTCCCAATGGTAAAAGCCTTGTAGGAATGAAATTCCCCAAGAGTCTTGTTGTGGTTGCTGGGTTGGATCTTGTTCAGGATTGGCAATTGGCTTATGTTGAAGGGCTTAAGAAAGCTGGTCAAGAGGTGAAACATCTATACCTGGACAAGGCAACAATCGGCTTCTACTTGTTGCCAAACAACGACCACTTCTATACTGTCATGGATGAGATAAGTAACTTTATGTTGAAGATGATAAGTTTGGAGAGATTGGCAATGGAGACAAATGCAAAAATTGGCTTGTTTTGA 1083 0.4589 MAGSNEVNLSESKRVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVFSFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVTGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWAALKWVNSRPWLKSEEDSKVHIYMVGDSSGGNIVHNVALKAVESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHAACNPFGPNGKSLVGMKFPKSLVVVAGLDLVQDWQLAYVEGLKKAGQEVKHLYLDKATIGFYLLPNNDHFYTVMDEISNFMLKMISLERLAMETNAKIGLF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0407 360 FunFam Gibberellin receptor GID1 1 342 - -
Vvi14g0407 360 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Vvi14g0407 360 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Vvi14g0407 360 SUPERFAMILY alpha/beta-Hydrolases 51 340 IPR029058 -
Vvi14g0407 360 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vvi14g0407 360 PANTHER ARYLACETAMIDE DEACETYLASE 43 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0407 Vvi-Chr14 4294261 4297881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0407 1 340 Carbohydrate Esterase AT3G05120 81.232 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0407 K14493 - rcu:8288487 619.387