Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0379 ATGGCAGAAATTCTTATTTCCATTGCAGCAAAAGTTGCAGAGTACCTGGTTGCTCCCATTGTACGTCCACTGGGTTACCTGTTTAACTACCGTAGCAACCTTGATAACCTTGAGGAACAAGTTGACAAGCTGGGTGATGCAAGGGAGAGGCGGCAGCGAGATGTGGATGACGCTAATAGGCAAGGGGATGAGATCGAACCTGATGTCCAGAAGTGGCTGACACGTACAGAAGGGATCATCCAAACGGCAAAGGAATTGATTGAAGATGAGAAGGCTGCAAGCACGAGCTGTTTCAATTTAAAGTTGCGGTACCAGCGAAGCAGGCAAGCGAAGAAGCAGTCTGGGGATATTGGTAAAATCCAAGAAGAAAATAAATTTAACAGGGTATCATATGGCCTTCCTCCACAAGGGATATGGTCTCCACGCCTCAGAGATTGTGGAGCTTTGGAATCGAGGGCATCTATTTTAAACGAAATTATGGAGGCCTTGAGAAATGATGATATCAGAATGATTGGTGTGTGGGGGATGGGCGGTGTGGGCAAAACCACTCTTGCCAATCAAGTAGCGAAAAAGGCCGAGGAAGATAAGTTATTTGAAAAGGTGGTTATGGCATTAAATATATCCCGAGTTCCGAACGTGACAAAAATTCAAGGAGAAATTGCAAGCATGTTAGGTTTGAAATTTGAGGAGGAAGAGGAATCGGGAAGAGCAGCCCGCTTAAGCAAAAGTTTGCAAAAAAATAAGACGGTCCTGGTGATTCTGGATGATATTTGGGAAGAACTTAGTCTGGAAAACATCGGAATTCCTCATGGAGATGCTCATAGGGGGTGTAAAGTGCTGCTGACTTCCAGAAAACAGGGTGTGTTATCTAGAAAGATGGCTACTCAAAAAAACTTCCGTGTTCAACATTTATGTGAAGAGGAAGCCTGGAGTTTATTTAAGAAGACAGCAGGTGATTCAGTGGAGCAGCTTAAATCCATAGCAATTAAAGTACTTAGAGAATGTGATGGTCTACCAGTTGCCATTGTAACAGTTGCAAAGGCGTTAAAAGGCGAGAGTGATGAGGCTGTGTGGAACAATGCTTTGCTAGAACTGGAGAATTCTGCAGCAATAAACATCGAGGACGTGCATGAAAAAGTATACTCATGTCTGGAGTTGAGCTACAACCACTTGAAAGGTGATGAAGTGAAGCGTTTGTTCTTACTTTGTGGTATGCTGGGCTATGGTGATATTTCACTGGATCAATTGTTAAAATATGGCATGGGTTTGGATTTGTTTGAACACGTGAGTTCATTGGAGCAAATAAGAAATAAACTAGTGACATTGGTCAAAATCCTCAAAGACTCGAGCTTGCTGCTTGATGCTGAAGATCGTTATCGGTCAGGTGTGGGGCCAGGTGTGTTTTTCGGAAATAATGATGAAAACAAGTTTGTCAGAATGCATGATGTTGTTGGTGATGTTGCCAGAGCAATTGCAGCAAAAGATCCTCATCGATTTGTTGTGATCAAAGAAGCTCTTGGATTAGAAGAATGGCAAAGGAAGGAGGAGTTCAGAAATTGCAGTCGTATATCTTTGCAATGCGGAGATCTCCGTGAGCTTCCGGAAAGATTGGTATGTTCCAAACTTGAATTCTTTTTATTGAATGGTAATGATCCGTCTTTGAGAATTCCAAACACCTTTTTTCAAGAGACGGAACTACTAAAAGTTTTGGACTTGTCTGCAAGGCATCTTACACCACTGCCTTCATCACTTGGTTTTCTTTCCAATCTTCGAACATTGCGTGTATACCGATGCACACTCCAAGACATGGCATTAATCGGAGAGCTAAAGAAACTACAAGTTCTTAGTTTTGCAAGTTGCGAAATTGAACGGTTGCCGAAAGAATTCATGCAATTGACTGATCTAAGGGTGCTGGACTTGTGGGATTGCTCTCATCTCGAAGTAATTCCCCAAAATGTCATATCAAGTTTATCTCGATTGGAGCATTTATGTTTAGCAAAAAGTTTTACCAAATGGGGGGCTGAAGGATTTGGTAGTGGAGAAAGCAATAATGCTTGCCTTTCTGAGCTGAACAACTTGTCCTATTTGAAGACTTTATATATAGAAATAACGGTACCCAATTTGCTATCAAAAGATCTGGTCTTTGAGAAGCTTACCAGATATGTGATATCAGTGTATTCCATTCCAGGATATGTTGATCATAATAGATCCGCAAGAACGTTGAAGCTCTGGAGGGTTAACAAACCTTGCTTGGTGGACTGCTTTTCCAAGCTGTTCAAGACAGTTGAAGTTTTAGAATTGCATGACTTGGAGGACACTAAGCATGTCCTTTACGAGTTTGATACAGATGATTTTCTTCAACTCAAGCATCTTGTTATCGGAAATTGTCCTGGGATTCAATACATTGTTGACTCGACCAAAGGGGTCCCATCACACAGTGCCCTTCCTATCTTGGAGGAATTGCGTCTTGGGAATCTCTATAACATGGATGCAGTATGCTATGGTCCAATTCCAGAGGGATCTTTTGGGAAGTTACGTTCTCTACTAGTGATTGGTTGTAAGAGGTTGAAATCTTTCATATCCCTTCCGATGGAGCAAGGAAAGAATGGATCGGTGTTACCTGAAATGGGATCCTTGGATTCGACACGGGACTTCTCCTCCACAGGAAGCAGTGCTACCCAGGAGTTATGTACGAGTGATGTTCCCACACCATTCTTCAATGAACAGGTTACACTCCCTAGCTTGGAGGACTTGACAATGGAATCCTTGGATAATGTGATAGCAATTTGGCACAACCAACTTCCTCTAGAGTCTTGTTGCAACTTTAAAAGTTTGGAAATATCAAAGTGCAACAAATTACTAAATGTTTTTCCATCCAATATCCTAAAAGGGTTACAAAGTTTGGAATATGTGAAAATAGATGATTGTGATTCCATAGAAGAGATTTTTGATCTACAGGGAGTAAATTGCAAGGAAATTCATGATATTGCAACCATTCCATTGCTTCATTTGTTTTTAGAGAGGCTAAATAGTTTGAAGAGTGTATGGAATAAGGATCCTCAAGGACTTGTCTCCTTTCAAAACCTACTGTTCTTAAAAGTTGCTAGGTGTCCTTGTTTAAAATATCTTTTTCCAATTACGGTAGCAGAAGGCCTTGTGCAACTTCATGAACTACAGATAATAAATTGTGGAGTGGAGGAAATTGTTGCAAATGAACATGGAGATGAAGTAAAGTCTTCATTATTCCCTAAACTAACCTCTCTCACACTCGAAGGATTAGACAAACTCAAAGGTTTCTACCGAGGAACACGTATTGCAAGAGGGCCACATTTGAAAAAGCTAATTATGTTGAAATGGGATCAAGTGGGGACACTTTTTCAAGAAATAGATTCAGAAGGTTATATTGATAGTCCAATTCAACAATCTTTCTTCTTGTTGGAAAAGGTATGGTTTGGTTTTTCTCCATTTCTTTTGCCATATTTGGATTGCTAA 3492 0.4081 MAEILISIAAKVAEYLVAPIVRPLGYLFNYRSNLDNLEEQVDKLGDARERRQRDVDDANRQGDEIEPDVQKWLTRTEGIIQTAKELIEDEKAASTSCFNLKLRYQRSRQAKKQSGDIGKIQEENKFNRVSYGLPPQGIWSPRLRDCGALESRASILNEIMEALRNDDIRMIGVWGMGGVGKTTLANQVAKKAEEDKLFEKVVMALNISRVPNVTKIQGEIASMLGLKFEEEEESGRAARLSKSLQKNKTVLVILDDIWEELSLENIGIPHGDAHRGCKVLLTSRKQGVLSRKMATQKNFRVQHLCEEEAWSLFKKTAGDSVEQLKSIAIKVLRECDGLPVAIVTVAKALKGESDEAVWNNALLELENSAAINIEDVHEKVYSCLELSYNHLKGDEVKRLFLLCGMLGYGDISLDQLLKYGMGLDLFEHVSSLEQIRNKLVTLVKILKDSSLLLDAEDRYRSGVGPGVFFGNNDENKFVRMHDVVGDVARAIAAKDPHRFVVIKEALGLEEWQRKEEFRNCSRISLQCGDLRELPERLVCSKLEFFLLNGNDPSLRIPNTFFQETELLKVLDLSARHLTPLPSSLGFLSNLRTLRVYRCTLQDMALIGELKKLQVLSFASCEIERLPKEFMQLTDLRVLDLWDCSHLEVIPQNVISSLSRLEHLCLAKSFTKWGAEGFGSGESNNACLSELNNLSYLKTLYIEITVPNLLSKDLVFEKLTRYVISVYSIPGYVDHNRSARTLKLWRVNKPCLVDCFSKLFKTVEVLELHDLEDTKHVLYEFDTDDFLQLKHLVIGNCPGIQYIVDSTKGVPSHSALPILEELRLGNLYNMDAVCYGPIPEGSFGKLRSLLVIGCKRLKSFISLPMEQGKNGSVLPEMGSLDSTRDFSSTGSSATQELCTSDVPTPFFNEQVTLPSLEDLTMESLDNVIAIWHNQLPLESCCNFKSLEISKCNKLLNVFPSNILKGLQSLEYVKIDDCDSIEEIFDLQGVNCKEIHDIATIPLLHLFLERLNSLKSVWNKDPQGLVSFQNLLFLKVARCPCLKYLFPITVAEGLVQLHELQIINCGVEEIVANEHGDEVKSSLFPKLTSLTLEGLDKLKGFYRGTRIARGPHLKKLIMLKWDQVGTLFQEIDSEGYIDSPIQQSFFLLEKVWFGFSPFLLPYLDC* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0379 1163 Gene3D - 304 391 IPR042197 -
Vvi14g0379 1163 SUPERFAMILY L domain-like 479 858 - -
Vvi14g0379 1163 PRINTS Disease resistance protein signature 630 646 - -
Vvi14g0379 1163 PRINTS Disease resistance protein signature 244 258 - -
Vvi14g0379 1163 PRINTS Disease resistance protein signature 335 349 - -
Vvi14g0379 1163 PRINTS Disease resistance protein signature 170 185 - -
Vvi14g0379 1163 FunFam Probable disease resistance protein At1g61300 148 297 - -
Vvi14g0379 1163 SUPERFAMILY L domain-like 903 1116 - -
Vvi14g0379 1163 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 989 1125 - -
Vvi14g0379 1163 Pfam NB-ARC domain 156 389 IPR002182 GO:0043531
Vvi14g0379 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 403 IPR027417 -
Vvi14g0379 1163 Gene3D Ribonuclease Inhibitor 507 868 IPR032675 -
Vvi14g0379 1163 Coils Coil 27 54 - -
Vvi14g0379 1163 Gene3D Ribonuclease Inhibitor 869 1121 IPR032675 -
Vvi14g0379 1163 Gene3D - 144 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0379 Vvi-Chr14 3885894 3892199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0379 167 495 WRKY Transcription Factor Family AT5G45050 27.434 1.67e-15 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0379 - - vvi:100248572 2280.37