Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0377 ATGGAGGCCTTGAGAAATGATGATATCAGGATGATTGGTGTGTGGGGGATGGGCGGTGTGGGCAAAACCACCCTTGCCAATCAAGTAGCGAAAAATGCCGAGGAAGATAAGTTATTTGAAAAGGTGGTTATGGCATTAAATATATCCCAAATTCCAAATGTGACAAAAATTCAGGAAGATATTGCAGGTATTTTGGGGTTGAAATTTGAGCAGGAAGGGGAATTAGAAAGAGCACACCGCTTACGTCGAAGTTTGAACAAACACAAGACGGTCCTGGTGATTTTGGATGATATTTGGGGGGAACTTCTGTTGGAAAAAATCGGAATTCCTTGTGGAGATGCTCAGAGGGGGTGTAAAGTGCTGCTGACTTCCAGAAGCCAGGGTCTGTTATCTAGAAGTATGGGTACTCAGATAAACTTCCATGTTCAACATTTATGTGAAGAGGAAGCCTGGAGTTTATTTAAGAAGACAGCAGGTGATTCAGTGGAGCAGCTTAAATCCATAGCAATTAAAGTACTTAGAGAATGTGATGGTCTACCAGTTGCCATTGTAACAGTTGCAAAGGCGTTAAAAGGCGAGAGTGGTGAGGCTGTGTGGAACAATGCTTTGCTAGAACTGGAGAATTCTGCACCAGCCAACATCGAGGACGTGGATGATAAAGTATACAAATGTCTGCAGTTGAGCTACGACCACTTGAAAAGTGAAGAAGTGAAGCGTTTGTTCTTACTTTGTGGTATGCTGGGCTATGGTGATATTTCAATGGATCAATTGTTAAAATGTGGCATGGGTTTGGATTTGTTTGAACACGTGAGTTCATTGGAGCAAATAACAAATAAACTAGTGACATTGGTCAAAATCCTCAAAGACTCAAGCTTGCTGCTTGATGTTGAAAATAAACATTTCTTTGAGTGGCCAGGTGTGTTTTTCGGATACAATTATGAAAACAGGTTTGTCAGAATGCATGATGTTGTTGGTGATGTTGCCAGAGCAATTGCAGCAGAAGGTCCTCATCGATTTGTTGTGATCAAAGAAGCTCTTGGATTAGAAGAATTGCAAAGGAAGGAGGAGTTCAGAAATTGCAGTCGTATATCTTTGAATTGCAAAAATCTCCATGAGCTTCCACAAAGATTGGTATGCCCCAGACTTGAATTCTTTGTATTGAATAGTGATGCTGAATCTTTGGGAATTCCAGACCCCTTTTTTGAAGGGACGGAACTACTAAAAGTTTTGGACTTGTCTAACGTGTGTCTTACACGACTGCCTTCATCACTTGGTTTTCTTTCCAATCTTCGAACATTGCGTGTATACCGATGCACATTCGAAGACATAGCAGTAATCGGAGAACTAAAGAAGCTACAAGTTCTTAGTTTTGAAAGTTGCAAAATTAAACGGTTGCCGAAAGAATTCATGCAATTGACTGATCTAAGGGCGCTGGACTTGTGGGATTGCTCTGATCTCGAAGTAATTCCCCAAAATGTCATATCAAGTGTATCTCGATTGGAGCATTTATGTTTAGTAAAAAGTTTTACCAAATGGGGGGCTGAAGGATTTGGTAGTGGAGAAAGCAATAATGCTTGCCTTTCTGAGCTGAACAACTTGTCCTATTTGAAGACTTTATGTATAGAAATAACGGATCCCAATTTGCTCTCAGCAGATCTGGTCTTTGAGAAGCTTACCAGATATGTGATATCAGTGGATCCCGAGGCAGACTGTGTTCTCGATACCAAAGGTTTTCTTCAACTCAAGTATCTCTCTATAATTCGTTGTCCTGGGATTCAATACATTGTTGATTCAATACACAGTGCCTTTCCTATCTTGGAGACATTGTTTATTTCTGGACTCCAGAACATGGATGCAGTATGCTGTGGCCCAATTCCAGAGGGATCTTTTGGGAAGTTACGTTCTTTAACAGTGAAGTATTGTATGAGGTTGAAATCATTCATATCCCTTCCGAGGGAGCAAGGAAGGGATCGATGGGTGAATCGTCAAATGGGATCCTTGGATTTGACACGGGACTTCATCTTTACGGGAACCGATGTTCCCACACCATTCTTCAATGAACAGGTATGTTAA 2073 0.411 MEALRNDDIRMIGVWGMGGVGKTTLANQVAKNAEEDKLFEKVVMALNISQIPNVTKIQEDIAGILGLKFEQEGELERAHRLRRSLNKHKTVLVILDDIWGELLLEKIGIPCGDAQRGCKVLLTSRSQGLLSRSMGTQINFHVQHLCEEEAWSLFKKTAGDSVEQLKSIAIKVLRECDGLPVAIVTVAKALKGESGEAVWNNALLELENSAPANIEDVDDKVYKCLQLSYDHLKSEEVKRLFLLCGMLGYGDISMDQLLKCGMGLDLFEHVSSLEQITNKLVTLVKILKDSSLLLDVENKHFFEWPGVFFGYNYENRFVRMHDVVGDVARAIAAEGPHRFVVIKEALGLEELQRKEEFRNCSRISLNCKNLHELPQRLVCPRLEFFVLNSDAESLGIPDPFFEGTELLKVLDLSNVCLTRLPSSLGFLSNLRTLRVYRCTFEDIAVIGELKKLQVLSFESCKIKRLPKEFMQLTDLRALDLWDCSDLEVIPQNVISSVSRLEHLCLVKSFTKWGAEGFGSGESNNACLSELNNLSYLKTLCIEITDPNLLSADLVFEKLTRYVISVDPEADCVLDTKGFLQLKYLSIIRCPGIQYIVDSIHSAFPILETLFISGLQNMDAVCCGPIPEGSFGKLRSLTVKYCMRLKSFISLPREQGRDRWVNRQMGSLDLTRDFIFTGTDVPTPFFNEQVC* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0377 690 SUPERFAMILY L domain-like 319 648 - -
Vvi14g0377 690 Gene3D Ribonuclease Inhibitor 342 512 IPR032675 -
Vvi14g0377 690 SMART AAA_5 8 145 IPR003593 GO:0016887
Vvi14g0377 690 FunFam Probable disease resistance protein At1g61300 1 137 - -
Vvi14g0377 690 Gene3D Ribonuclease Inhibitor 513 657 IPR032675 -
Vvi14g0377 690 Gene3D - 1 143 IPR027417 -
Vvi14g0377 690 Gene3D - 145 232 IPR042197 -
Vvi14g0377 690 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1 651 - -
Vvi14g0377 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 244 IPR027417 -
Vvi14g0377 690 Pfam NB-ARC domain 4 230 IPR002182 GO:0043531
Vvi14g0377 690 PRINTS Disease resistance protein signature 85 99 - -
Vvi14g0377 690 PRINTS Disease resistance protein signature 176 190 - -
Vvi14g0377 690 PRINTS Disease resistance protein signature 11 26 - -
Vvi14g0377 690 PRINTS Disease resistance protein signature 470 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0377 Vvi-Chr14 3797710 3799911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0377 8 491 WRKY Transcription Factor Family AT5G45050 25.946 2.15e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0377 - - vvi:100243559 1354.73