Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0352 ATGGCTCCAACAAAAAAATATAGAGGTGTGAATAAGCGGTTTTTAAACTCCCATGAAGTTTCTCTTGATAGAGACATTGAGAATTCAACCAAATCTAGGCAACGGAAGAGGAAGTTGTCTGATATGTTAGGATCTCAATGGAGCAAGGAAGAGCTTGAGCATTTTTATGAAGCCTATAGGAAGTATGGGAAAGATTGGAAGAAGGTAGCTGGTGTAGTACGTAACAGATCTCTGGAAATGGTGGAGGCCCTTTACAATATGAATCGAGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTGGTTGGCCTAATAGCAATGATGACAGATCACTACAATGTCCTGGGAGGTGGCGACAACGAGAGCAATGATGTTTCAGGTACACCTCGAAAAACTCAGAAGCCTGTGCGGGGAAAAGTTCATCTTAGCATCTCAAAAGAAGAGCTTTTGCAGCCTCCATCAGTTGCAAATGATGGATGCCTATCATTATTGAAGAGGAGTCTCTCAGATGATGGTTTTCATTTGGTGTTTATGGGGACTTATGGCCCTATGTTGGACGTAAAGTGTGGGAAGAGGAGAATGGGGGAAGTTATGGGAGGATCCTTGTGCCAAAGCTTTTGCTTTTACAAGGTCCTGCAGAAGCACTACACTCTCAACCTCAATAGCAAAACCATGACCTGCAAGATTAGAGCTAAGGTGTATATGGGAGAGGAGTCCTCTTCGCTTTTAGGCTTCTTGGAGTGGTTAGCGGCTCCCTAA 759 0.4414 MAPTKKYRGVNKRFLNSHEVSLDRDIENSTKSRQRKRKLSDMLGSQWSKEELEHFYEAYRKYGKDWKKVAGVVRNRSLEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLGGGDNESNDVSGTPRKTQKPVRGKVHLSISKEELLQPPSVANDGCLSLLKRSLSDDGFHLVFMGTYGPMLDVKCGKRRMGEVMGGSLCQSFCFYKVLQKHYTLNLNSKTMTCKIRAKVYMGEESSSLLGFLEWLAAP* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0352 252 Gene3D - 3 99 - -
Vvi14g0352 252 SUPERFAMILY Homeodomain-like 37 91 IPR009057 -
Vvi14g0352 252 Pfam Myb-like DNA-binding domain 45 81 IPR001005 -
Vvi14g0352 252 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Vvi14g0352 252 CDD SANT 47 81 IPR001005 -
Vvi14g0352 252 PANTHER LIN-9 1 168 IPR010561 GO:0006351|GO:0017053
Vvi14g0352 252 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Vvi14g0352 252 SMART sant 43 91 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vvi14g0352 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0352 - - vvi:100266555 343.199