Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0348 ATGGAAAATTCACAGGACGATGCGAAGATTTTCAGCGTTCGAATCGTTTCGATGGATTACTATATGGCGCCTCCGATTCCAGACCTCGACATTTGTTACAGTAGCTTTCAAGGTGGTATGGTGAAGGAAGTTCCTGTAATAAGGATTTATGGCTCTACTCCTGTGGGCCAGAAGACTTGCTTGCATGTTCATCGAGCTTTGCCCTATTTGTATGTGCCATGCACGGATCTAATGCCTCAGTCACCCCAAGAAGCTGATACATACACACATGCTGTATCTCTTGGTGTTGAGAAAGCCTTGAAGCTTAAAGGTAATGCTGGTTCAAAACGACAACATGTGCATGGCTGCAGCCTTGTTCGGGCAAAAAACTTTTATGGTTACCATTCGTCAGAGGAGCTATTTGTGAAAATATATCTCTACCATCCGCATGATGTCTCTCGTGCTGCTAATCTTCTTCTGGGAGGTTCAGTTCTTGATAAAAGTTTACAGCCCCATGAATCACATATTCCCTTTCTTCTCCAATTTCTGATTGACTACAACTTGTATGGGATGGGTCATCTACATCTATCGAAGATGAAATTTCGTCATCCAGTACCTGATGTTTTCTCCTCAAGGAAAGTTAATTATAATGGCCAACAAAAACTGGAGCCAGATGACTTTGCTTGCATATCTGCTCATTTGCAGGCAGATTCAAGTGGTGACACATGTTTAAGTTCACCAGTTTGGATATCTTCCACAATTCCAGGTGGTTGGATGTGGCAATTTTCTAGTCAACTAGATGCTTCACCAGGTCAGGGCATTTGCAGCCCTAAGCGTCAAAGTACCTGTGAGCTTGAGGGAGATGCTATTGTAGAAGAGATTCTTAATCAGCAGTTTAAATTGTACTCATCCCTTTCACAAACCCATTCAGATGTGAAAATGGTCCGGTCACTGATACCAATTTGGGAGGAGGAGTTTGAAAGGACTGGAATGCATGAGGTGGCAATGCCTCCTGATCCTGGCAAACCACTGCCAGAAGATGTTTTGAGAAGTCTCTCACATGGGCTTGAATTTGAGAACAAACTTGGAGAGTTGTGTAATCAAGCAGGTGACTCTTTGGCTTTTACTCCATTGGAGAAAGATGAGAGGTTTATGCAGTCAATAACATCTTCAGCTGATGAGAGAAATTTAGTTGGAGATGTACTTGTTCGCCCTAATGACAATGATGGAGAGCCTTCAAAGTGTTTCAAAGATCAAAATAAGAACATTTCTCCAGTATCACAAGGTTCATTGTGTGAAGAAGATGATGATGCAATACCCAGTGAAGGCAGGGGTATGTGTCTACAACAATTGTCGGTTGACGAAAGGCAAAGATCTGAAAATATTGGACCATCAGGTCTGAAGGTTGCAGATAATGAAGCCCTGGGGCTACTAAGCTGGCTTGCCTCTTCTCAGGCTGCAGAAGATATAAACTCTGACGATGAACTTGTTTGTCAGACCATTCTGAGTCCATTGTTGCCCACAGTAACTATTGATAAGGTGTTGGAGAAAGCCAATATGGATTATGAGAATGAATCCCAACAAGAGTGTCAGGACATTCTTGATTCAGTTGAGGATTTAGCTGACTTTAAGGGTTTAAAGGAGAGAGCCTCTTGTTCCACAGATCATAGCCATTCACCTCAAACTTCATTAGAGAAAATGATCCCCCAAGTGGATGGTTCTGGTGATGATCCTAATGATTGTTCAGGTAATTCATCTGAAACAGAGATGAAAAGTGAGACTAAGAGGTTTTCTCAGCACCAGGTCCTTCAAGATACTGGTGCAAGTTTCTCTAATAAGCATAAAAGGAACCAGTCTTTATGGGGCTCTTTACCTTTAACAACAACTCAAAAGGTGAATGATAACTTAAAATCTGTCAGTTTGAACATGGCCAAGAAAGATGCCAGTGAAGTTAAAGACGGTGCAGATAAAAGTTTCTTGGCCAGAAATGAGGAAGAAAAATGTTGTGAGGCTTTATGCAATGTGAGAACAGATGTCAATGATTTAAAAGAAGCAAGTACTTTAGTTGGATGCTCTATGCGGGACTTGATGAGGAGAAAAAGATGCCACCGGGTTGAGCCATCTGAATGTGTGATTCATACTAAAAAGGTTCTTTCAGAAAAGGAACTGAAAGATGTTTCATTTCTTCACCCAAAACAGTTTCATGCATTGCAGGACAATGGGCATCACATGAGGCCTTCTCAGTCTCCCAACTTCTGGCCTTCATCTACCCATCAGCAAATAGATTTTCAAGAGGCTTGTGATTTTAACTCTGACTATTCTGCCTGTTCTATGTATGGTAAATTACCTAGTTTTTCCAGCACTGATGGCTCATTGCTCATCAATATATCGAAGGATGTACAATTTGATCATTGCGGGAGACGGGATGATGAGGTTGGCACAGAAGCAACTGCTGGATCCAGAAACTTCACTATTACAGGTCACTCTCAAATGAACACTGGTACAAAAGAATCACTGCAGCCTTTTAACACTGAGGTGCGAGATTCTGCAGCTTCCATGGTCGATTTTGAATTTTCTAATTGCAAAGAGTATGCTTGCAAACCTGATCCTTCAACTGATGTTCAGTTTTTGAAGTTTGATACTGGTGATAAACATTTTGTTGATGAGAGATTGAAGCAAACTAAAGCATCTGCTTCAAGCTGTTTGTCAAATTCACCTTTTGAACATGAAATGGTATGTCGAGATGGGTACACTTGCAAAAGTGGCCGTGACTGCAGGACCTCCATTGAGTGTTTGCCTGAAATATCTTCTGAGAATCTTGAAGGTTGGGATGGTGCTACTGGCACAACACTTTCACAATTTAAGAATTGTGGTGGTGGAGATTGGGGAAATGATGCTGGCTTGTCTGGGACTCACAATTTAGTATCCACAGTTGTCAACATGGAAGCAAAACCTGTGGAACTTATTGGCATGACCTTCCACCAGAAGCCTCCCACTGTAGACTGGACGGATGGGACTTTTGATAATGCCTTGTTGTCACCTGCTATCCCCAATTGCTCTTCTCTTGAGAATGAGGAAAGTTGTAAAGGGAAATCAGGTCAGAATTCCAATTGCCTTGAATTGTATGCTACAACCCATGTGTGCTTTTTTTTTTCTTTCCTAAGCTTGGAACCTGCTTAA 3159 0.4172 MENSQDDAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKALKLKGNAGSKRQHVHGCSLVRAKNFYGYHSSEELFVKIYLYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLIDYNLYGMGHLHLSKMKFRHPVPDVFSSRKVNYNGQQKLEPDDFACISAHLQADSSGDTCLSSPVWISSTIPGGWMWQFSSQLDASPGQGICSPKRQSTCELEGDAIVEEILNQQFKLYSSLSQTHSDVKMVRSLIPIWEEEFERTGMHEVAMPPDPGKPLPEDVLRSLSHGLEFENKLGELCNQAGDSLAFTPLEKDERFMQSITSSADERNLVGDVLVRPNDNDGEPSKCFKDQNKNISPVSQGSLCEEDDDAIPSEGRGMCLQQLSVDERQRSENIGPSGLKVADNEALGLLSWLASSQAAEDINSDDELVCQTILSPLLPTVTIDKVLEKANMDYENESQQECQDILDSVEDLADFKGLKERASCSTDHSHSPQTSLEKMIPQVDGSGDDPNDCSGNSSETEMKSETKRFSQHQVLQDTGASFSNKHKRNQSLWGSLPLTTTQKVNDNLKSVSLNMAKKDASEVKDGADKSFLARNEEEKCCEALCNVRTDVNDLKEASTLVGCSMRDLMRRKRCHRVEPSECVIHTKKVLSEKELKDVSFLHPKQFHALQDNGHHMRPSQSPNFWPSSTHQQIDFQEACDFNSDYSACSMYGKLPSFSSTDGSLLINISKDVQFDHCGRRDDEVGTEATAGSRNFTITGHSQMNTGTKESLQPFNTEVRDSAASMVDFEFSNCKEYACKPDPSTDVQFLKFDTGDKHFVDERLKQTKASASSCLSNSPFEHEMVCRDGYTCKSGRDCRTSIECLPEISSENLEGWDGATGTTLSQFKNCGGGDWGNDAGLSGTHNLVSTVVNMEAKPVELIGMTFHQKPPTVDWTDGTFDNALLSPAIPNCSSLENEESCKGKSGQNSNCLELYATTHVCFFFSFLSLEPA* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0348 1052 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 5 806 IPR030559 GO:0006281|GO:0016035|GO:0019985
Vvi14g0348 1052 FunFam DNA polymerase 30 196 - -
Vvi14g0348 1052 SUPERFAMILY Ribonuclease H-like 27 290 IPR012337 -
Vvi14g0348 1052 Pfam DNA polymerase family B, exonuclease domain 56 196 IPR006133 -
Vvi14g0348 1052 Gene3D DNA Polymerase, chain B, domain 1 29 196 - -
Vvi14g0348 1052 MobiDBLite consensus disorder prediction 544 594 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0348 43 195 Core DNA Replication Machinery Family AT5G63960 24.684 1.56e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0348 K02350 - vvi:100263126 2105.87