Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0320 ATGACACTACTTTTACAGATTTTTCAGTGCTTGGGTACCGATAATAAAAGAGCAGAAAACTCTACTATATATGTAAACGTATGGATCATGCAGATTGATATTAAATTGGACCTGCCTCCACCTGATTGTACATTTCTTTATAGTCTGGTTAAGATCTTATTTTTCTCTCTTAGTTTTCTTGCTCTACTATCAACTTCCACATTCCTCTGCAAAAACTCCACTGATTGTCAATCTCTGCTCAAATTCAAACAAGGCATAACAGGTGATCCAGATGGTCATCTCCAAGATTGGAATGAAACCATGTTCTTCTGCAACTGGACAGGGATTACATGCCACCAGCAGCTTAAGAACCGGGTCATAGCCATTGAGCTCATAAACATGCGCTTAGAGGGAGTTATCTCACCATACATATCCAATCTATCCCATCTCACCACCCTCTCTTTGCAAGCCAACAGCTTGTACGGAGGGATTCCAGCTACCATTGGAGAGCTTTCTGAGTTAACATTCATAAACATGAGTCGTAATAAGCTTGGGGGCAATATTCCAGCCTCAATAAAAGGCTGCTGGAGCCTGGAGACAATAGACTTGGACTATACCAATCTGACTGGAAGCATTCCTGCTGTACTGGGCCAAATGACAAACTTGACATACCTATGTCTCTCTCAGAACAGCCTCACTGGAGCTATACCATCGTTTCTTTCGAATCTAACCAAGCTGAAAGATTTAGAATTGCAGGTTAATTACTTCACAGGAAGGATTCCAGAGGAGCTAGGAGCATTAACAAAGCTGGAGATATTGTACCTCCACATGAACTTTTTGGAAGAAAGCATACCTGCATCCATCAGTAATTGCACTGCCCTGCGTCACATTACACTGTTTGAGAATCGGTTAACGGGAACAATCCCTTTAGAATTGGGGTCAAAGCTCCATAACTTGCAGAGATTGTACTTCCAACAAAACCAACTTTCTGGGAAAATTCCAGTGACCCTGTCCAATCTTTCTCAGCTGACACTGCTTGATCTTAGCCTCAACCAGTTAGAGGGGGAAGTCCCTCCTGAGTTGGGGAAGTTGAAGAAACTTGAGAGACTTTACCTTCATAGCAATAACCTGGTGAGCGGTTCCAACAACTCTTCCCTCAGTTTTCTAACTCCTCTCACTAATTGTTCACGTCTACAGAAACTGCACTTAGGGGCATGTCTGTTTGCAGGAAGTTTACCGGCTTCAATTGGCAGTCTTTCCAAAGACCTCTACTACTTGAATCTTCGAAACAACAAATTAACAGGAGACCTACCAGCTGAAATTGGAAATCTAAGCGGCCTTGTGACTCTAGACCTGTGGTATAATTTTTTGAATGGAGTTCCTGCAACAATTGGGAAGCTTAGGCAGTTGCAGAGATTACACTTGGGAAGAAACAAACTTCTTGGGCCAATTCCAGATGAACTTGGGCAGATGGCTAACCTTGGTTTACTGGAACTTAGTGATAATTTGATTAGTGGGACAATCCCATCTTCTCTTGGTAACCTGTCACAGTTGAGATATCTTTACTTGTCTCACAACCACCTCACAGGGAAAATTCCCATCCAACTCACCCAATGTTCTCTTCTAATGCTTCTTGACTTGTCTTTTAACAACTTACAAGGGTCTCTTCCCACAGAAATTGGTCATTTCTCAAACCTAGCTCTTTCACTCAACCTTTCGAACAACAATCTTCAAGGAGAACTACCTGCTAGTATTGGAAATCTGGCATCTGTGCTGGCAATTGACTTGTCAGCGAATAAATTCTTCGGAGTGATACCAAGTTCGATTGGAAGATGCATTTCAATGGAGTATCTGAACCTCTCTCACAACATGCTTGAAGCTACAATCCCAGAGTCCCTGAAGCAAATCATTGATCTAGGATATCTGGACTTGGCTTTCAATAATTTAACAGGAAATGTTCCAATCTGGATTGGTGACAGCCAGAAGATCAAGAATCTCAATTTATCGTATAACAGATTAACAGGAGAGGTTCCAAATAGTGGGAGGTATAAAAATCTAGGAAGCGGCTCATTCATGGGGAATATGGGGCTCTGTGGTGGCACCAAACTTATGGGTCTCCATCCATGTGAAATTCAGAAACAAAAGCACAAGAAAAGGAAATGGATTTATTACTTGTTTGCAATAATAACTTGTTCTCTGCTTCTCTTTGTGCTGATCGCCCTCACTGTTCGTCGTTTCTTCTTCAAAAATAGGAGTGCAGGTGCGGAGACTGCAATTCTAATGTGTTCCCCAACCCATCATGGAACCCAAACTTTAACTGAAAGGGAAATCGAAATTGCAACTGGCGGTTTTGATGAGGCTAATCTGTTAGGGAAAGGAAGTTTTGGTAGGGTGTATAAAGCTATCATCAATGATGGAAAAACTGTTGTGGCAGTTAAGGTTCTGCAAGAAGAGTGTGTTCAGGGTTACAGAAGTTTTAAAAGGGAGTGTCAAATACTGTCTGAAATTAGACATAGGAATCTGGTTAGAATGATAGGATCGACCTGGAATTCAGGATTCAAGGCTATTGTTCTCGAATATATAGGCAATGGGAACTTGGAACAGCATCTTTACCCTGGTGGGTCAGATGAAGGAGGTAGTGAATTAAAATTGAGGGAAAGAATGGGAATAGCAATAGATGTTGCAAATGGCTTGGAGTATCTTCATGAGGGTTGTCCTGTTCAAGTTGTACACTGTGACCTGAAACCACAAAATGTTCTTTTGGACAATGATATGGTGGCTCATGTAGCAGATTTTGGTATTGGAAAGCTCATTTCAGGTGACAAACCAAGAGGACATGTTACTACCACAACTGCTTTTCTACGAGGATCTGTCGGGTATATCCCCCCAGAATATGGGCAGGGGATCGATGTCTCAACAAGAGGAGATGTATACAGTTTTGGAGTGATGATGTTAGAGATGATAACACGGAAGAGACCAACGAATGAAATGTTTTCAGATGGACTTGATCTAAGGAAATGGGTGTGTTCTGCTTTTCCAAATCAAGTTTTGGATATTGTAGACATCTCACTGAAGCACGAAGCATATTTGGAAGAGGGGAGTGGTGCTTTACATAAGCTTGAGCAATGCTGTATCCACATGCTTGATGCAGGGATGATGTGTACAGAAGAGAACCCCCAAAAGCGTCCCCTTATCTCTTCGGTTGCTCAAAGGCTAAAGAATGTCTGGAAAGAAATGGGATTTGGAACACTTTATATGGCAAAGGAAGAAAATGTGGACATGTCACTGAACTCAAAATAG 3279 0.4175 MTLLLQIFQCLGTDNKRAENSTIYVNVWIMQIDIKLDLPPPDCTFLYSLVKILFFSLSFLALLSTSTFLCKNSTDCQSLLKFKQGITGDPDGHLQDWNETMFFCNWTGITCHQQLKNRVIAIELINMRLEGVISPYISNLSHLTTLSLQANSLYGGIPATIGELSELTFINMSRNKLGGNIPASIKGCWSLETIDLDYTNLTGSIPAVLGQMTNLTYLCLSQNSLTGAIPSFLSNLTKLKDLELQVNYFTGRIPEELGALTKLEILYLHMNFLEESIPASISNCTALRHITLFENRLTGTIPLELGSKLHNLQRLYFQQNQLSGKIPVTLSNLSQLTLLDLSLNQLEGEVPPELGKLKKLERLYLHSNNLVSGSNNSSLSFLTPLTNCSRLQKLHLGACLFAGSLPASIGSLSKDLYYLNLRNNKLTGDLPAEIGNLSGLVTLDLWYNFLNGVPATIGKLRQLQRLHLGRNKLLGPIPDELGQMANLGLLELSDNLISGTIPSSLGNLSQLRYLYLSHNHLTGKIPIQLTQCSLLMLLDLSFNNLQGSLPTEIGHFSNLALSLNLSNNNLQGELPASIGNLASVLAIDLSANKFFGVIPSSIGRCISMEYLNLSHNMLEATIPESLKQIIDLGYLDLAFNNLTGNVPIWIGDSQKIKNLNLSYNRLTGEVPNSGRYKNLGSGSFMGNMGLCGGTKLMGLHPCEIQKQKHKKRKWIYYLFAIITCSLLLFVLIALTVRRFFFKNRSAGAETAILMCSPTHHGTQTLTEREIEIATGGFDEANLLGKGSFGRVYKAIINDGKTVVAVKVLQEECVQGYRSFKRECQILSEIRHRNLVRMIGSTWNSGFKAIVLEYIGNGNLEQHLYPGGSDEGGSELKLRERMGIAIDVANGLEYLHEGCPVQVVHCDLKPQNVLLDNDMVAHVADFGIGKLISGDKPRGHVTTTTAFLRGSVGYIPPEYGQGIDVSTRGDVYSFGVMMLEMITRKRPTNEMFSDGLDLRKWVCSAFPNQVLDIVDISLKHEAYLEEGSGALHKLEQCCIHMLDAGMMCTEENPQKRPLISSVAQRLKNVWKEMGFGTLYMAKEENVDMSLNSK* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0320 1092 ProSiteProfiles Leucine-rich repeat profile. 359 380 IPR001611 GO:0005515
Vvi14g0320 1092 CDD STKc_IRAK 783 1067 - -
Vvi14g0320 1092 SUPERFAMILY L domain-like 376 717 - -
Vvi14g0320 1092 Gene3D Ribonuclease Inhibitor 310 370 IPR032675 -
Vvi14g0320 1092 Gene3D Ribonuclease Inhibitor 74 191 IPR032675 -
Vvi14g0320 1092 FunFam LRR receptor-like serine/threonine-protein kinase EFR 72 358 - -
Vvi14g0320 1092 FunFam LRR receptor-like serine/threonine-protein kinase EFR 451 708 - -
Vvi14g0320 1092 ProSitePatterns Protein kinases ATP-binding region signature. 783 806 IPR017441 GO:0005524
Vvi14g0320 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Vvi14g0320 1092 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 298 1064 - -
Vvi14g0320 1092 Gene3D Ribonuclease Inhibitor 199 306 IPR032675 -
Vvi14g0320 1092 Gene3D Transferase(Phosphotransferase) domain 1 854 1082 - -
Vvi14g0320 1092 Pfam Protein tyrosine and serine/threonine kinase 781 1065 IPR001245 GO:0004672|GO:0006468
Vvi14g0320 1092 SUPERFAMILY Protein kinase-like (PK-like) 758 1065 IPR011009 -
Vvi14g0320 1092 SUPERFAMILY L domain-like 76 370 - -
Vvi14g0320 1092 Gene3D Phosphorylase Kinase; domain 1 762 853 - -
Vvi14g0320 1092 SMART serkin_6 777 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0320 1092 Pfam Leucine rich repeat 190 247 IPR001611 GO:0005515
Vvi14g0320 1092 Pfam Leucine rich repeat 461 521 IPR001611 GO:0005515
Vvi14g0320 1092 Pfam Leucine rich repeat N-terminal domain 73 111 IPR013210 -
Vvi14g0320 1092 ProSiteProfiles Protein kinase domain profile. 777 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0320 1092 SMART LRR_sd22_2 309 335 - -
Vvi14g0320 1092 SMART LRR_sd22_2 484 510 - -
Vvi14g0320 1092 SMART LRR_sd22_2 357 378 - -
Vvi14g0320 1092 SMART LRR_sd22_2 212 238 - -
Vvi14g0320 1092 SMART LRR_sd22_2 260 286 - -
Vvi14g0320 1092 SMART LRR_sd22_2 140 166 - -
Vvi14g0320 1092 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 854 1076 - -
Vvi14g0320 1092 Gene3D Ribonuclease Inhibitor 373 711 IPR032675 -
Vvi14g0320 1092 SMART LRR_typ_2 260 284 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 309 332 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 357 380 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 508 532 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 460 484 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 333 356 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 140 164 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 212 236 IPR003591 -
Vvi14g0320 1092 SMART LRR_typ_2 437 459 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0320 Vvi-Chr14 3117470 3125237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0320 62 1068 Receptor kinase-like Gene Family AT3G47570 38.244 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vvi14g0320 PK_Tyr_Ser-Thr 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0320 - - vvi:100240751 2003.41